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ZNF687 (zinc finger protein 687)

Identity

Alias_symbol (synonym)KIAA1441
Other aliasPDB6
HGNC (Hugo) ZNF687
LocusID (NCBI) 57592
Atlas_Id 54071
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 151254788 and ends at 151264381 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
RUNX1 (21q22.12) / ZNF687 (1q21.3)ZNF687 (1q21.3) / RUNX1 (21q22.12)ZNF687 (1q21.3) / ZNF687 (1q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(1;21)(q21;q22) RUNX1/ZNF687


External links

Nomenclature
HGNC (Hugo)ZNF687   29277
Cards
Entrez_Gene (NCBI)ZNF687  57592  zinc finger protein 687
AliasesPDB6
GeneCards (Weizmann)ZNF687
Ensembl hg19 (Hinxton)ENSG00000143373 [Gene_View]  chr1:151254788-151264381 [Contig_View]  ZNF687 [Vega]
Ensembl hg38 (Hinxton)ENSG00000143373 [Gene_View]  chr1:151254788-151264381 [Contig_View]  ZNF687 [Vega]
ICGC DataPortalENSG00000143373
TCGA cBioPortalZNF687
AceView (NCBI)ZNF687
Genatlas (Paris)ZNF687
WikiGenes57592
SOURCE (Princeton)ZNF687
Genetics Home Reference (NIH)ZNF687
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF687  -     chr1:151254788-151264381 +  1q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF687  -     1q21.3   [Description]    (hg38-Dec_2013)
EnsemblZNF687 - 1q21.3 [CytoView hg19]  ZNF687 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIZNF687 [Mapview hg19]  ZNF687 [Mapview hg38]
OMIM610568   
Gene and transcription
Genbank (Entrez)AB037862 AK023105 BC020245 BC032463 CR749307
RefSeq transcript (Entrez)NM_001304763 NM_001304764 NM_020832
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)ZNF687
Cluster EST : UnigeneHs.225083 [ NCBI ]
CGAP (NCI)Hs.225083
Alternative Splicing GalleryENSG00000143373
Gene ExpressionZNF687 [ NCBI-GEO ]   ZNF687 [ EBI - ARRAY_EXPRESS ]   ZNF687 [ SEEK ]   ZNF687 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF687 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57592
GTEX Portal (Tissue expression)ZNF687
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N1G0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N1G0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N1G0
Splice isoforms : SwissVarQ8N1G0
PhosPhoSitePlusQ8N1G0
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like   
Domain families : Pfam (Sanger)zf-C2H2_11 (PF16622)   
Domain families : Pfam (NCBI)pfam16622   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF687
DMDM Disease mutations57592
Blocks (Seattle)ZNF687
SuperfamilyQ8N1G0
Human Protein AtlasENSG00000143373
Peptide AtlasQ8N1G0
HPRD13859
IPIIPI00395813   IPI00744026   IPI00916604   IPI00002054   IPI00853371   
Protein Interaction databases
DIP (DOE-UCLA)Q8N1G0
IntAct (EBI)Q8N1G0
FunCoupENSG00000143373
BioGRIDZNF687
STRING (EMBL)ZNF687
ZODIACZNF687
Ontologies - Pathways
QuickGOQ8N1G0
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF687
Atlas of Cancer Signalling NetworkZNF687
Wikipedia pathwaysZNF687
Orthology - Evolution
OrthoDB57592
GeneTree (enSembl)ENSG00000143373
Phylogenetic Trees/Animal Genes : TreeFamZNF687
HOVERGENQ8N1G0
HOGENOMQ8N1G0
Homologs : HomoloGeneZNF687
Homology/Alignments : Family Browser (UCSC)ZNF687
Gene fusions - Rearrangements
Fusion : MitelmanRUNX1/ZNF687 [21q22.12/1q21.3]  [t(1;21)(q21;q22)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF687 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF687
dbVarZNF687
ClinVarZNF687
1000_GenomesZNF687 
Exome Variant ServerZNF687
ExAC (Exome Aggregation Consortium)ZNF687 (select the gene name)
Genetic variants : HAPMAP57592
Genomic Variants (DGV)ZNF687 [DGVbeta]
DECIPHER (Syndromes)1:151254788-151264381  ENSG00000143373
CONAN: Copy Number AnalysisZNF687 
Mutations
ICGC Data PortalZNF687 
TCGA Data PortalZNF687 
Broad Tumor PortalZNF687
OASIS PortalZNF687 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF687  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF687
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF687
DgiDB (Drug Gene Interaction Database)ZNF687
DoCM (Curated mutations)ZNF687 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF687 (select a term)
intoGenZNF687
Cancer3DZNF687(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610568   
Orphanet
MedgenZNF687
Genetic Testing Registry ZNF687
NextProtQ8N1G0 [Medical]
TSGene57592
GENETestsZNF687
Huge Navigator ZNF687 [HugePedia]
snp3D : Map Gene to Disease57592
BioCentury BCIQZNF687
ClinGenZNF687
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57592
Chemical/Pharm GKB GenePA142670486
Clinical trialZNF687
Miscellaneous
canSAR (ICR)ZNF687 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF687
EVEXZNF687
GoPubMedZNF687
iHOPZNF687
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:25:53 CEST 2017

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