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ZNF692 (zinc finger protein 692)

Identity

Alias_symbol (synonym)FLJ20531
Zfp692
AREBP
Other alias
HGNC (Hugo) ZNF692
LocusID (NCBI) 55657
Atlas_Id 76336
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248850004 and ends at 248858926 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF692 (1q44) / LRP1 (12q13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF692   26049
Cards
Entrez_Gene (NCBI)ZNF692  55657  zinc finger protein 692
AliasesAREBP; Zfp692
GeneCards (Weizmann)ZNF692
Ensembl hg19 (Hinxton)ENSG00000171163 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171163 [Gene_View]  chr1:248850004-248858926 [Contig_View]  ZNF692 [Vega]
ICGC DataPortalENSG00000171163
TCGA cBioPortalZNF692
AceView (NCBI)ZNF692
Genatlas (Paris)ZNF692
WikiGenes55657
SOURCE (Princeton)ZNF692
Genetics Home Reference (NIH)ZNF692
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF692  -     chr1:248850004-248858926 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF692  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblZNF692 - 1q44 [CytoView hg19]  ZNF692 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIZNF692 [Mapview hg19]  ZNF692 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB209706 AF256175 AK000538 AK001070 AK225535
RefSeq transcript (Entrez)NM_001136036 NM_001193328 NM_001350072 NM_001350073 NM_017865
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF692
Cluster EST : UnigeneHs.377705 [ NCBI ]
CGAP (NCI)Hs.377705
Alternative Splicing GalleryENSG00000171163
Gene ExpressionZNF692 [ NCBI-GEO ]   ZNF692 [ EBI - ARRAY_EXPRESS ]   ZNF692 [ SEEK ]   ZNF692 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF692 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55657
GTEX Portal (Tissue expression)ZNF692
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BU19   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BU19  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BU19
Splice isoforms : SwissVarQ9BU19
PhosPhoSitePlusQ9BU19
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF692
DMDM Disease mutations55657
Blocks (Seattle)ZNF692
PDB (SRS)2D9H    2DLK   
PDB (PDBSum)2D9H    2DLK   
PDB (IMB)2D9H    2DLK   
PDB (RSDB)2D9H    2DLK   
Structural Biology KnowledgeBase2D9H    2DLK   
SCOP (Structural Classification of Proteins)2D9H    2DLK   
CATH (Classification of proteins structures)2D9H    2DLK   
SuperfamilyQ9BU19
Human Protein AtlasENSG00000171163
Peptide AtlasQ9BU19
HPRD07922
IPIIPI00914579   IPI00301870   IPI00743559   IPI00552803   IPI00909139   IPI00981281   IPI00884038   IPI00982845   IPI00941081   IPI00976622   IPI00981698   IPI00974299   IPI00106882   IPI00975950   IPI00981023   IPI00984838   
Protein Interaction databases
DIP (DOE-UCLA)Q9BU19
IntAct (EBI)Q9BU19
FunCoupENSG00000171163
BioGRIDZNF692
STRING (EMBL)ZNF692
ZODIACZNF692
Ontologies - Pathways
QuickGOQ9BU19
Ontology : AmiGODNA binding  nucleus  nucleolus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  nucleolus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF692
Atlas of Cancer Signalling NetworkZNF692
Wikipedia pathwaysZNF692
Orthology - Evolution
OrthoDB55657
GeneTree (enSembl)ENSG00000171163
Phylogenetic Trees/Animal Genes : TreeFamZNF692
HOVERGENQ9BU19
HOGENOMQ9BU19
Homologs : HomoloGeneZNF692
Homology/Alignments : Family Browser (UCSC)ZNF692
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF692 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF692
dbVarZNF692
ClinVarZNF692
1000_GenomesZNF692 
Exome Variant ServerZNF692
ExAC (Exome Aggregation Consortium)ZNF692 (select the gene name)
Genetic variants : HAPMAP55657
Genomic Variants (DGV)ZNF692 [DGVbeta]
DECIPHERZNF692 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF692 
Mutations
ICGC Data PortalZNF692 
TCGA Data PortalZNF692 
Broad Tumor PortalZNF692
OASIS PortalZNF692 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF692  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF692
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF692
DgiDB (Drug Gene Interaction Database)ZNF692
DoCM (Curated mutations)ZNF692 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF692 (select a term)
intoGenZNF692
Cancer3DZNF692(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF692
Genetic Testing Registry ZNF692
NextProtQ9BU19 [Medical]
TSGene55657
GENETestsZNF692
Target ValidationZNF692
Huge Navigator ZNF692 [HugePedia]
snp3D : Map Gene to Disease55657
BioCentury BCIQZNF692
ClinGenZNF692
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55657
Chemical/Pharm GKB GenePA142670491
Clinical trialZNF692
Miscellaneous
canSAR (ICR)ZNF692 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF692
EVEXZNF692
GoPubMedZNF692
iHOPZNF692
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:51:04 CEST 2017

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