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ZNF699 (zinc finger protein 699)

Identity

Alias_symbol (synonym)FLJ38144
hang
Other alias
HGNC (Hugo) ZNF699
LocusID (NCBI) 374879
Atlas_Id 76339
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 9405986 and ends at 9415795 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ZNF699 (19p13.2) / ELAVL1 (19p13.2)ZNF699 (19p13.2) / ZSWIM4 (19p13.13)ZNF699 ELAVL1
ZNF699 ZSWIM4

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF699   24750
Cards
Entrez_Gene (NCBI)ZNF699  374879  zinc finger protein 699
Aliaseshang
GeneCards (Weizmann)ZNF699
Ensembl hg19 (Hinxton)ENSG00000196110 [Gene_View]  chr19:9405986-9415795 [Contig_View]  ZNF699 [Vega]
Ensembl hg38 (Hinxton)ENSG00000196110 [Gene_View]  chr19:9405986-9415795 [Contig_View]  ZNF699 [Vega]
ICGC DataPortalENSG00000196110
TCGA cBioPortalZNF699
AceView (NCBI)ZNF699
Genatlas (Paris)ZNF699
WikiGenes374879
SOURCE (Princeton)ZNF699
Genetics Home Reference (NIH)ZNF699
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF699  -     chr19:9405986-9415795 -  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF699  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblZNF699 - 19p13.2 [CytoView hg19]  ZNF699 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF699 [Mapview hg19]  ZNF699 [Mapview hg38]
OMIM609571   
Gene and transcription
Genbank (Entrez)AK095463 BC109267 BC109268
RefSeq transcript (Entrez)NM_198535
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)ZNF699
Cluster EST : UnigeneHs.633842 [ NCBI ]
CGAP (NCI)Hs.633842
Alternative Splicing GalleryENSG00000196110
Gene ExpressionZNF699 [ NCBI-GEO ]   ZNF699 [ EBI - ARRAY_EXPRESS ]   ZNF699 [ SEEK ]   ZNF699 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF699 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374879
GTEX Portal (Tissue expression)ZNF699
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ32M78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ32M78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ32M78
Splice isoforms : SwissVarQ32M78
PhosPhoSitePlusQ32M78
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF699
DMDM Disease mutations374879
Blocks (Seattle)ZNF699
SuperfamilyQ32M78
Human Protein AtlasENSG00000196110
Peptide AtlasQ32M78
IPIIPI00373927   
Protein Interaction databases
DIP (DOE-UCLA)Q32M78
IntAct (EBI)Q32M78
FunCoupENSG00000196110
BioGRIDZNF699
STRING (EMBL)ZNF699
ZODIACZNF699
Ontologies - Pathways
QuickGOQ32M78
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF699
Atlas of Cancer Signalling NetworkZNF699
Wikipedia pathwaysZNF699
Orthology - Evolution
OrthoDB374879
GeneTree (enSembl)ENSG00000196110
Phylogenetic Trees/Animal Genes : TreeFamZNF699
HOVERGENQ32M78
HOGENOMQ32M78
Homologs : HomoloGeneZNF699
Homology/Alignments : Family Browser (UCSC)ZNF699
Gene fusions - Rearrangements
Fusion: TCGAZNF699 ELAVL1
Fusion: TCGAZNF699 ZSWIM4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF699 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF699
dbVarZNF699
ClinVarZNF699
1000_GenomesZNF699 
Exome Variant ServerZNF699
ExAC (Exome Aggregation Consortium)ZNF699 (select the gene name)
Genetic variants : HAPMAP374879
Genomic Variants (DGV)ZNF699 [DGVbeta]
DECIPHER (Syndromes)19:9405986-9415795  ENSG00000196110
CONAN: Copy Number AnalysisZNF699 
Mutations
ICGC Data PortalZNF699 
TCGA Data PortalZNF699 
Broad Tumor PortalZNF699
OASIS PortalZNF699 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF699  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF699
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF699
DgiDB (Drug Gene Interaction Database)ZNF699
DoCM (Curated mutations)ZNF699 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF699 (select a term)
intoGenZNF699
Cancer3DZNF699(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609571   
Orphanet
MedgenZNF699
Genetic Testing Registry ZNF699
NextProtQ32M78 [Medical]
TSGene374879
GENETestsZNF699
Huge Navigator ZNF699 [HugePedia]
snp3D : Map Gene to Disease374879
BioCentury BCIQZNF699
ClinGenZNF699
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374879
Chemical/Pharm GKB GenePA142670496
Clinical trialZNF699
Miscellaneous
canSAR (ICR)ZNF699 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF699
EVEXZNF699
GoPubMedZNF699
iHOPZNF699
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:40 CET 2017

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