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ZNF70 (zinc finger protein 70)

Identity

Alias_nameszinc finger protein 70 (Cos17)
Alias_symbol (synonym)Cos17
MGC48959
Other alias
HGNC (Hugo) ZNF70
LocusID (NCBI) 7621
Atlas_Id 76341
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 23741584 and ends at 23751092 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF70   13140
Cards
Entrez_Gene (NCBI)ZNF70  7621  zinc finger protein 70
AliasesCos17
GeneCards (Weizmann)ZNF70
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:23741584-23751092 [Contig_View]  ZNF70 [Vega]
TCGA cBioPortalZNF70
AceView (NCBI)ZNF70
Genatlas (Paris)ZNF70
WikiGenes7621
SOURCE (Princeton)ZNF70
Genetics Home Reference (NIH)ZNF70
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF70  -     chr22:23741584-23751092 -  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF70  -     22q11.23   [Description]    (hg19-Feb_2009)
EnsemblZNF70 - 22q11.23 [CytoView hg19]  ZNF70 - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBIZNF70 [Mapview hg19]  ZNF70 [Mapview hg38]
OMIM194544   
Gene and transcription
Genbank (Entrez)AF086087 AK122721 AK126511 BC040161 CR456615
RefSeq transcript (Entrez)NM_021916
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF70
Cluster EST : UnigeneHs.547601 [ NCBI ]
CGAP (NCI)Hs.547601
Gene ExpressionZNF70 [ NCBI-GEO ]   ZNF70 [ EBI - ARRAY_EXPRESS ]   ZNF70 [ SEEK ]   ZNF70 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF70 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7621
GTEX Portal (Tissue expression)ZNF70
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UC06   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UC06  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UC06
Splice isoforms : SwissVarQ9UC06
PhosPhoSitePlusQ9UC06
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF70
DMDM Disease mutations7621
Blocks (Seattle)ZNF70
SuperfamilyQ9UC06
Peptide AtlasQ9UC06
HPRD11837
IPIIPI00045732   
Protein Interaction databases
DIP (DOE-UCLA)Q9UC06
IntAct (EBI)Q9UC06
BioGRIDZNF70
STRING (EMBL)ZNF70
ZODIACZNF70
Ontologies - Pathways
QuickGOQ9UC06
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF70
Atlas of Cancer Signalling NetworkZNF70
Wikipedia pathwaysZNF70
Orthology - Evolution
OrthoDB7621
Phylogenetic Trees/Animal Genes : TreeFamZNF70
HOVERGENQ9UC06
HOGENOMQ9UC06
Homologs : HomoloGeneZNF70
Homology/Alignments : Family Browser (UCSC)ZNF70
Gene fusions - Rearrangements
Tumor Fusion PortalZNF70
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF70 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF70
dbVarZNF70
ClinVarZNF70
1000_GenomesZNF70 
Exome Variant ServerZNF70
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP7621
Genomic Variants (DGV)ZNF70 [DGVbeta]
DECIPHERZNF70 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF70 
Mutations
ICGC Data PortalZNF70 
TCGA Data PortalZNF70 
Broad Tumor PortalZNF70
OASIS PortalZNF70 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF70  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF70
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF70
DgiDB (Drug Gene Interaction Database)ZNF70
DoCM (Curated mutations)ZNF70 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF70 (select a term)
intoGenZNF70
Cancer3DZNF70(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194544   
Orphanet
DisGeNETZNF70
MedgenZNF70
Genetic Testing Registry ZNF70
NextProtQ9UC06 [Medical]
TSGene7621
GENETestsZNF70
Target ValidationZNF70
Huge Navigator ZNF70 [HugePedia]
snp3D : Map Gene to Disease7621
BioCentury BCIQZNF70
ClinGenZNF70
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7621
Chemical/Pharm GKB GenePA37714
Clinical trialZNF70
Miscellaneous
canSAR (ICR)ZNF70 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF70
EVEXZNF70
GoPubMedZNF70
iHOPZNF70
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:44:32 CET 2017

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