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ZNF700 (zinc finger protein 700)

Identity

Alias_symbol (synonym)DKFZp434I1610
Other alias-
HGNC (Hugo) ZNF700
LocusID (NCBI) 90592
Atlas_Id 54013
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 11925068 and ends at 11950773 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF700 (19p13.2) / MAST1 (19p13.2)ZNF700 (19p13.2) / TYK2 (19p13.2)ZNF700 19p13.2 / MAST1 19p13.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]

Solid Tumors TT_t1919p13p13ID103268


External links

Nomenclature
HGNC (Hugo)ZNF700   25292
Cards
Entrez_Gene (NCBI)ZNF700  90592  zinc finger protein 700
Aliases
GeneCards (Weizmann)ZNF700
Ensembl hg19 (Hinxton)ENSG00000196757 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196757 [Gene_View]  ENSG00000196757 [Sequence]  chr19:11925068-11950773 [Contig_View]  ZNF700 [Vega]
ICGC DataPortalENSG00000196757
TCGA cBioPortalZNF700
AceView (NCBI)ZNF700
Genatlas (Paris)ZNF700
WikiGenes90592
SOURCE (Princeton)ZNF700
Genetics Home Reference (NIH)ZNF700
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF700  -     chr19:11925068-11950773 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF700  -     19p13.2   [Description]    (hg19-Feb_2009)
GoldenPathZNF700 - 19p13.2 [CytoView hg19]  ZNF700 - 19p13.2 [CytoView hg38]
ImmunoBaseENSG00000196757
Mapping of homologs : NCBIZNF700 [Mapview hg19]  ZNF700 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126871 AK308305 AL136732 BC111557 BC136777
RefSeq transcript (Entrez)NM_001271847 NM_001271848 NM_144566
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF700
Cluster EST : UnigeneHs.528486 [ NCBI ]
CGAP (NCI)Hs.528486
Alternative Splicing GalleryENSG00000196757
Gene ExpressionZNF700 [ NCBI-GEO ]   ZNF700 [ EBI - ARRAY_EXPRESS ]   ZNF700 [ SEEK ]   ZNF700 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF700 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90592
GTEX Portal (Tissue expression)ZNF700
Human Protein AtlasENSG00000196757-ZNF700 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H0M5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H0M5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H0M5
Splice isoforms : SwissVarQ9H0M5
PhosPhoSitePlusQ9H0M5
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF700
DMDM Disease mutations90592
Blocks (Seattle)ZNF700
SuperfamilyQ9H0M5
Human Protein Atlas [tissue]ENSG00000196757-ZNF700 [tissue]
Peptide AtlasQ9H0M5
HPRD10903
IPIIPI00026524   
Protein Interaction databases
DIP (DOE-UCLA)Q9H0M5
IntAct (EBI)Q9H0M5
FunCoupENSG00000196757
BioGRIDZNF700
STRING (EMBL)ZNF700
ZODIACZNF700
Ontologies - Pathways
QuickGOQ9H0M5
Ontology : AmiGODNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIDNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF700
Atlas of Cancer Signalling NetworkZNF700
Wikipedia pathwaysZNF700
Orthology - Evolution
OrthoDB90592
GeneTree (enSembl)ENSG00000196757
Phylogenetic Trees/Animal Genes : TreeFamZNF700
HOGENOMQ9H0M5
Homologs : HomoloGeneZNF700
Homology/Alignments : Family Browser (UCSC)ZNF700
Gene fusions - Rearrangements
Fusion : MitelmanZNF700/MAST1 [19p13.2/19p13.2]  
Fusion : QuiverZNF700
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF700 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF700
dbVarZNF700
ClinVarZNF700
1000_GenomesZNF700 
Exome Variant ServerZNF700
ExAC (Exome Aggregation Consortium)ENSG00000196757
GNOMAD BrowserENSG00000196757
Varsome BrowserZNF700
Genetic variants : HAPMAP90592
Genomic Variants (DGV)ZNF700 [DGVbeta]
DECIPHERZNF700 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF700 
Mutations
ICGC Data PortalZNF700 
TCGA Data PortalZNF700 
Broad Tumor PortalZNF700
OASIS PortalZNF700 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF700  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF700
Mutations and Diseases : HGMDZNF700
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF700
DgiDB (Drug Gene Interaction Database)ZNF700
DoCM (Curated mutations)ZNF700 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF700 (select a term)
intoGenZNF700
Cancer3DZNF700(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF700
MedgenZNF700
Genetic Testing Registry ZNF700
NextProtQ9H0M5 [Medical]
TSGene90592
GENETestsZNF700
Target ValidationZNF700
Huge Navigator ZNF700 [HugePedia]
snp3D : Map Gene to Disease90592
BioCentury BCIQZNF700
ClinGenZNF700
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90592
Chemical/Pharm GKB GenePA142670497
Clinical trialZNF700
Miscellaneous
canSAR (ICR)ZNF700 (select the gene name)
DataMed IndexZNF700
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF700
EVEXZNF700
GoPubMedZNF700
iHOPZNF700
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 26 18:36:21 CEST 2019

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