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ZNF701 (zinc finger protein 701)

Identity

Alias_symbol (synonym)FLJ10891
Other alias-
HGNC (Hugo) ZNF701
LocusID (NCBI) 55762
Atlas_Id 76342
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 52570664 and ends at 52587174 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF701   25597
Cards
Entrez_Gene (NCBI)ZNF701  55762  zinc finger protein 701
Aliases
GeneCards (Weizmann)ZNF701
Ensembl hg19 (Hinxton)ENSG00000167562 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167562 [Gene_View]  chr19:52570664-52587174 [Contig_View]  ZNF701 [Vega]
ICGC DataPortalENSG00000167562
TCGA cBioPortalZNF701
AceView (NCBI)ZNF701
Genatlas (Paris)ZNF701
WikiGenes55762
SOURCE (Princeton)ZNF701
Genetics Home Reference (NIH)ZNF701
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF701  -     chr19:52570664-52587174 +  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF701  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblZNF701 - 19q13.41 [CytoView hg19]  ZNF701 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBIZNF701 [Mapview hg19]  ZNF701 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001753 BC054884 BC067346 BC080612 BC131719
RefSeq transcript (Entrez)NM_001172655 NM_018260
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF701
Cluster EST : UnigeneHs.235167 [ NCBI ]
CGAP (NCI)Hs.235167
Alternative Splicing GalleryENSG00000167562
Gene ExpressionZNF701 [ NCBI-GEO ]   ZNF701 [ EBI - ARRAY_EXPRESS ]   ZNF701 [ SEEK ]   ZNF701 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF701 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55762
GTEX Portal (Tissue expression)ZNF701
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NV72   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NV72  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NV72
Splice isoforms : SwissVarQ9NV72
PhosPhoSitePlusQ9NV72
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF701
DMDM Disease mutations55762
Blocks (Seattle)ZNF701
SuperfamilyQ9NV72
Human Protein AtlasENSG00000167562
Peptide AtlasQ9NV72
HPRD07709
IPIIPI00300969   IPI00955427   
Protein Interaction databases
DIP (DOE-UCLA)Q9NV72
IntAct (EBI)Q9NV72
FunCoupENSG00000167562
BioGRIDZNF701
STRING (EMBL)ZNF701
ZODIACZNF701
Ontologies - Pathways
QuickGOQ9NV72
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF701
Atlas of Cancer Signalling NetworkZNF701
Wikipedia pathwaysZNF701
Orthology - Evolution
OrthoDB55762
GeneTree (enSembl)ENSG00000167562
Phylogenetic Trees/Animal Genes : TreeFamZNF701
HOVERGENQ9NV72
HOGENOMQ9NV72
Homologs : HomoloGeneZNF701
Homology/Alignments : Family Browser (UCSC)ZNF701
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF701 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF701
dbVarZNF701
ClinVarZNF701
1000_GenomesZNF701 
Exome Variant ServerZNF701
ExAC (Exome Aggregation Consortium)ZNF701 (select the gene name)
Genetic variants : HAPMAP55762
Genomic Variants (DGV)ZNF701 [DGVbeta]
DECIPHERZNF701 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF701 
Mutations
ICGC Data PortalZNF701 
TCGA Data PortalZNF701 
Broad Tumor PortalZNF701
OASIS PortalZNF701 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF701  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF701
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF701
DgiDB (Drug Gene Interaction Database)ZNF701
DoCM (Curated mutations)ZNF701 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF701 (select a term)
intoGenZNF701
Cancer3DZNF701(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF701
Genetic Testing Registry ZNF701
NextProtQ9NV72 [Medical]
TSGene55762
GENETestsZNF701
Target ValidationZNF701
Huge Navigator ZNF701 [HugePedia]
snp3D : Map Gene to Disease55762
BioCentury BCIQZNF701
ClinGenZNF701
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55762
Chemical/Pharm GKB GenePA142670498
Clinical trialZNF701
Miscellaneous
canSAR (ICR)ZNF701 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF701
EVEXZNF701
GoPubMedZNF701
iHOPZNF701
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:11 CEST 2017

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