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ZNF702P (zinc finger protein 702, pseudogene)

Identity

Alias_namesZNF702
zinc finger protein 702
zinc finger protein 702 pseudogene
zinc finger protein 702 (pseudogene)
Alias_symbol (synonym)FLJ12985
Other alias
HGNC (Hugo) ZNF702P
LocusID (NCBI) 79986
Atlas_Id 76343
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 53470985 and ends at 53473713 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF702P   25775
Cards
Entrez_Gene (NCBI)ZNF702P  79986  zinc finger protein 702, pseudogene
AliasesZNF702
GeneCards (Weizmann)ZNF702P
Ensembl hg19 (Hinxton)ENSG00000242779 [Gene_View]  chr19:53470985-53473713 [Contig_View]  ZNF702P [Vega]
Ensembl hg38 (Hinxton)ENSG00000242779 [Gene_View]  chr19:53470985-53473713 [Contig_View]  ZNF702P [Vega]
ICGC DataPortalENSG00000242779
TCGA cBioPortalZNF702P
AceView (NCBI)ZNF702P
Genatlas (Paris)ZNF702P
WikiGenes79986
SOURCE (Princeton)ZNF702P
Genetics Home Reference (NIH)ZNF702P
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF702P  -     chr19:53470985-53473713 -  19q13.41   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF702P  -     19q13.41   [Description]    (hg38-Dec_2013)
EnsemblZNF702P - 19q13.41 [CytoView hg19]  ZNF702P - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBIZNF702P [Mapview hg19]  ZNF702P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023047 AK092593 AL832505 BC032590
RefSeq transcript (Entrez)NM_024924
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF702P
Cluster EST : UnigeneHs.714428 [ NCBI ]
CGAP (NCI)Hs.714428
Alternative Splicing GalleryENSG00000242779
Gene ExpressionZNF702P [ NCBI-GEO ]   ZNF702P [ EBI - ARRAY_EXPRESS ]   ZNF702P [ SEEK ]   ZNF702P [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF702P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79986
GTEX Portal (Tissue expression)ZNF702P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H963   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H963  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H963
Splice isoforms : SwissVarQ9H963
PhosPhoSitePlusQ9H963
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF702P
DMDM Disease mutations79986
Blocks (Seattle)ZNF702P
SuperfamilyQ9H963
Human Protein AtlasENSG00000242779
Peptide AtlasQ9H963
HPRD07806
IPIIPI00017140   
Protein Interaction databases
DIP (DOE-UCLA)Q9H963
IntAct (EBI)Q9H963
FunCoupENSG00000242779
BioGRIDZNF702P
STRING (EMBL)ZNF702P
ZODIACZNF702P
Ontologies - Pathways
QuickGOQ9H963
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF702P
Atlas of Cancer Signalling NetworkZNF702P
Wikipedia pathwaysZNF702P
Orthology - Evolution
OrthoDB79986
GeneTree (enSembl)ENSG00000242779
Phylogenetic Trees/Animal Genes : TreeFamZNF702P
HOVERGENQ9H963
HOGENOMQ9H963
Homologs : HomoloGeneZNF702P
Homology/Alignments : Family Browser (UCSC)ZNF702P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF702P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF702P
dbVarZNF702P
ClinVarZNF702P
1000_GenomesZNF702P 
Exome Variant ServerZNF702P
ExAC (Exome Aggregation Consortium)ZNF702P (select the gene name)
Genetic variants : HAPMAP79986
Genomic Variants (DGV)ZNF702P [DGVbeta]
DECIPHER (Syndromes)19:53470985-53473713  ENSG00000242779
CONAN: Copy Number AnalysisZNF702P 
Mutations
ICGC Data PortalZNF702P 
TCGA Data PortalZNF702P 
Broad Tumor PortalZNF702P
OASIS PortalZNF702P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF702P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF702P
DgiDB (Drug Gene Interaction Database)ZNF702P
DoCM (Curated mutations)ZNF702P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF702P (select a term)
intoGenZNF702P
Cancer3DZNF702P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF702P
Genetic Testing Registry ZNF702P
NextProtQ9H963 [Medical]
TSGene79986
GENETestsZNF702P
Huge Navigator ZNF702P [HugePedia]
snp3D : Map Gene to Disease79986
BioCentury BCIQZNF702P
ClinGenZNF702P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79986
Chemical/Pharm GKB GenePA142670499
Clinical trialZNF702P
Miscellaneous
canSAR (ICR)ZNF702P (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF702P
EVEXZNF702P
GoPubMedZNF702P
iHOPZNF702P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:41 CET 2017

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