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ZNF705A (zinc finger protein 705A)

Identity

Alias_symbol (synonym)FLJ16353
Other alias-
HGNC (Hugo) ZNF705A
LocusID (NCBI) 440077
Atlas_Id 76344
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 8325150 and ends at 8332642 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LOC100507266 () / ZNF705A (12p13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF705A   32281
Cards
Entrez_Gene (NCBI)ZNF705A  440077  zinc finger protein 705A
Aliases
GeneCards (Weizmann)ZNF705A
Ensembl hg19 (Hinxton)ENSG00000196946 [Gene_View]  chr12:8325150-8332642 [Contig_View]  ZNF705A [Vega]
Ensembl hg38 (Hinxton)ENSG00000196946 [Gene_View]  chr12:8325150-8332642 [Contig_View]  ZNF705A [Vega]
ICGC DataPortalENSG00000196946
TCGA cBioPortalZNF705A
AceView (NCBI)ZNF705A
Genatlas (Paris)ZNF705A
WikiGenes440077
SOURCE (Princeton)ZNF705A
Genetics Home Reference (NIH)ZNF705A
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF705A  -     chr12:8325150-8332642 +  12p13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF705A  -     12p13.31   [Description]    (hg38-Dec_2013)
EnsemblZNF705A - 12p13.31 [CytoView hg19]  ZNF705A - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBIZNF705A [Mapview hg19]  ZNF705A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004328
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_009714 NW_004929383
Consensus coding sequences : CCDS (NCBI)ZNF705A
Cluster EST : UnigeneHs.438536 [ NCBI ]
CGAP (NCI)Hs.438536
Alternative Splicing GalleryENSG00000196946
Gene ExpressionZNF705A [ NCBI-GEO ]   ZNF705A [ EBI - ARRAY_EXPRESS ]   ZNF705A [ SEEK ]   ZNF705A [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF705A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)440077
GTEX Portal (Tissue expression)ZNF705A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZN79   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZN79  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZN79
Splice isoforms : SwissVarQ6ZN79
PhosPhoSitePlusQ6ZN79
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF705A
DMDM Disease mutations440077
Blocks (Seattle)ZNF705A
SuperfamilyQ6ZN79
Human Protein AtlasENSG00000196946
Peptide AtlasQ6ZN79
HPRD13364
IPIIPI00418583   IPI01014621   IPI01015873   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZN79
IntAct (EBI)Q6ZN79
FunCoupENSG00000196946
BioGRIDZNF705A
STRING (EMBL)ZNF705A
ZODIACZNF705A
Ontologies - Pathways
QuickGOQ6ZN79
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF705A
Atlas of Cancer Signalling NetworkZNF705A
Wikipedia pathwaysZNF705A
Orthology - Evolution
OrthoDB440077
GeneTree (enSembl)ENSG00000196946
Phylogenetic Trees/Animal Genes : TreeFamZNF705A
HOVERGENQ6ZN79
HOGENOMQ6ZN79
Homologs : HomoloGeneZNF705A
Homology/Alignments : Family Browser (UCSC)ZNF705A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF705A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF705A
dbVarZNF705A
ClinVarZNF705A
1000_GenomesZNF705A 
Exome Variant ServerZNF705A
ExAC (Exome Aggregation Consortium)ZNF705A (select the gene name)
Genetic variants : HAPMAP440077
Genomic Variants (DGV)ZNF705A [DGVbeta]
DECIPHER (Syndromes)12:8325150-8332642  ENSG00000196946
CONAN: Copy Number AnalysisZNF705A 
Mutations
ICGC Data PortalZNF705A 
TCGA Data PortalZNF705A 
Broad Tumor PortalZNF705A
OASIS PortalZNF705A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF705A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF705A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF705A
DgiDB (Drug Gene Interaction Database)ZNF705A
DoCM (Curated mutations)ZNF705A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF705A (select a term)
intoGenZNF705A
Cancer3DZNF705A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF705A
Genetic Testing Registry ZNF705A
NextProtQ6ZN79 [Medical]
TSGene440077
GENETestsZNF705A
Huge Navigator ZNF705A [HugePedia]
snp3D : Map Gene to Disease440077
BioCentury BCIQZNF705A
ClinGenZNF705A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440077
Chemical/Pharm GKB GenePA142670502
Clinical trialZNF705A
Miscellaneous
canSAR (ICR)ZNF705A (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF705A
EVEXZNF705A
GoPubMedZNF705A
iHOPZNF705A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:42 CET 2017

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