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ZNF706 (zinc finger protein 706)

Identity

Alias_symbol (synonym)HSPC038
Other aliasPNAS-106
PNAS-113
HGNC (Hugo) ZNF706
LocusID (NCBI) 51123
Atlas_Id 76349
Location 8q22.3  [Link to chromosome band 8q22]
Location_base_pair Starts at 102209266 and ends at 102217960 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BRCA1 (17q21.31) / ZNF706 (8q22.3)ZNF706 (8q22.3) / ZNF706 (8q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF706   24992
Cards
Entrez_Gene (NCBI)ZNF706  51123  zinc finger protein 706
AliasesHSPC038; PNAS-106; PNAS-113
GeneCards (Weizmann)ZNF706
Ensembl hg19 (Hinxton)ENSG00000120963 [Gene_View]  chr8:102209266-102217960 [Contig_View]  ZNF706 [Vega]
Ensembl hg38 (Hinxton)ENSG00000120963 [Gene_View]  chr8:102209266-102217960 [Contig_View]  ZNF706 [Vega]
ICGC DataPortalENSG00000120963
TCGA cBioPortalZNF706
AceView (NCBI)ZNF706
Genatlas (Paris)ZNF706
WikiGenes51123
SOURCE (Princeton)ZNF706
Genetics Home Reference (NIH)ZNF706
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF706  -     chr8:102209266-102217960 -  8q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF706  -     8q22.3   [Description]    (hg38-Dec_2013)
EnsemblZNF706 - 8q22.3 [CytoView hg19]  ZNF706 - 8q22.3 [CytoView hg38]
Mapping of homologs : NCBIZNF706 [Mapview hg19]  ZNF706 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF125099 AF275802 AF275809 AK027802 AK129859
RefSeq transcript (Entrez)NM_001042510 NM_001267708 NM_001267709 NM_016096
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)ZNF706
Cluster EST : UnigeneHs.374485 [ NCBI ]
CGAP (NCI)Hs.374485
Alternative Splicing GalleryENSG00000120963
Gene ExpressionZNF706 [ NCBI-GEO ]   ZNF706 [ EBI - ARRAY_EXPRESS ]   ZNF706 [ SEEK ]   ZNF706 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF706 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51123
GTEX Portal (Tissue expression)ZNF706
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5V0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5V0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5V0
Splice isoforms : SwissVarQ9Y5V0
PhosPhoSitePlusQ9Y5V0
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)   
Domains : Interpro (EBI)At2g23090_like    Uncharacterised_SERF    Znf_C2H2-like   
Domain families : Pfam (Sanger)4F5 (PF04419)   
Domain families : Pfam (NCBI)pfam04419   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF706
DMDM Disease mutations51123
Blocks (Seattle)ZNF706
SuperfamilyQ9Y5V0
Human Protein AtlasENSG00000120963
Peptide AtlasQ9Y5V0
HPRD13688
IPIIPI00183657   IPI00983275   IPI00979126   IPI00984953   IPI00976387   IPI00982508   IPI00974005   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5V0
IntAct (EBI)Q9Y5V0
FunCoupENSG00000120963
BioGRIDZNF706
STRING (EMBL)ZNF706
ZODIACZNF706
Ontologies - Pathways
QuickGOQ9Y5V0
Ontology : AmiGOnucleus  cytoplasm  regulation of translation  negative regulation of transcription, DNA-templated  metal ion binding  negative regulation of stem cell maintenance  
Ontology : EGO-EBInucleus  cytoplasm  regulation of translation  negative regulation of transcription, DNA-templated  metal ion binding  negative regulation of stem cell maintenance  
NDEx NetworkZNF706
Atlas of Cancer Signalling NetworkZNF706
Wikipedia pathwaysZNF706
Orthology - Evolution
OrthoDB51123
GeneTree (enSembl)ENSG00000120963
Phylogenetic Trees/Animal Genes : TreeFamZNF706
HOVERGENQ9Y5V0
HOGENOMQ9Y5V0
Homologs : HomoloGeneZNF706
Homology/Alignments : Family Browser (UCSC)ZNF706
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF706 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF706
dbVarZNF706
ClinVarZNF706
1000_GenomesZNF706 
Exome Variant ServerZNF706
ExAC (Exome Aggregation Consortium)ZNF706 (select the gene name)
Genetic variants : HAPMAP51123
Genomic Variants (DGV)ZNF706 [DGVbeta]
DECIPHER (Syndromes)8:102209266-102217960  ENSG00000120963
CONAN: Copy Number AnalysisZNF706 
Mutations
ICGC Data PortalZNF706 
TCGA Data PortalZNF706 
Broad Tumor PortalZNF706
OASIS PortalZNF706 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF706  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF706
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF706
DgiDB (Drug Gene Interaction Database)ZNF706
DoCM (Curated mutations)ZNF706 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF706 (select a term)
intoGenZNF706
Cancer3DZNF706(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF706
Genetic Testing Registry ZNF706
NextProtQ9Y5V0 [Medical]
TSGene51123
GENETestsZNF706
Huge Navigator ZNF706 [HugePedia]
snp3D : Map Gene to Disease51123
BioCentury BCIQZNF706
ClinGenZNF706
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51123
Chemical/Pharm GKB GenePA142670505
Clinical trialZNF706
Miscellaneous
canSAR (ICR)ZNF706 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF706
EVEXZNF706
GoPubMedZNF706
iHOPZNF706
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:43 CET 2017

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