Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZNF708 (zinc finger protein 708)

Identity

Alias (NCBI)KOX8
ZNF15
ZNF15L1
HGNC (Hugo) ZNF708
HGNC Alias symbKOX8
HGNC Previous nameZNF15
 ZNF15L1
HGNC Previous namezinc finger protein 15-like 1 (KOX 8)
 zinc finger protein 708
 zinc finger protein 708 (KOX8)
LocusID (NCBI) 7562
Atlas_Id 76351
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21291160 and ends at 21329410 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF708 (19p12)::CYP46A1 (14q32.2)ZNF708 (19p12)::ILF3 (19p13.2)ZNF708 (19p12)::PTPRZ1 (7q31.32)
ZNF708 (19p12)::UBD (6p22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF708   12945
Cards
Entrez_Gene (NCBI)ZNF708    zinc finger protein 708
AliasesKOX8; ZNF15; ZNF15L1
GeneCards (Weizmann)ZNF708
Ensembl hg19 (Hinxton)ENSG00000182141 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182141 [Gene_View]  ENSG00000182141 [Sequence]  chr19:21291160-21329410 [Contig_View]  ZNF708 [Vega]
ICGC DataPortalENSG00000182141
TCGA cBioPortalZNF708
AceView (NCBI)ZNF708
Genatlas (Paris)ZNF708
SOURCE (Princeton)ZNF708
Genetics Home Reference (NIH)ZNF708
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF708  -     chr19:21291160-21329410 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF708  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF708 - 19p12 [CytoView hg19]  ZNF708 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000182141
Genome Data Viewer NCBIZNF708 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK128184 AK131527 AK311130 BC039403 BX103920
RefSeq transcript (Entrez)NM_001297560 NM_001297561 NM_021269
Consensus coding sequences : CCDS (NCBI)ZNF708
Gene ExpressionZNF708 [ NCBI-GEO ]   ZNF708 [ EBI - ARRAY_EXPRESS ]   ZNF708 [ SEEK ]   ZNF708 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF708 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF708 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7562
GTEX Portal (Tissue expression)ZNF708
Human Protein AtlasENSG00000182141-ZNF708 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP17019   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP17019  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP17019
PhosPhoSitePlusP17019
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF708
SuperfamilyP17019
AlphaFold pdb e-kbP17019   
Human Protein Atlas [tissue]ENSG00000182141-ZNF708 [tissue]
HPRD18322
Protein Interaction databases
DIP (DOE-UCLA)P17019
IntAct (EBI)P17019
BioGRIDZNF708
STRING (EMBL)ZNF708
ZODIACZNF708
Ontologies - Pathways
QuickGOP17019
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF708
Atlas of Cancer Signalling NetworkZNF708
Wikipedia pathwaysZNF708
Orthology - Evolution
OrthoDB7562
GeneTree (enSembl)ENSG00000182141
Phylogenetic Trees/Animal Genes : TreeFamZNF708
Homologs : HomoloGeneZNF708
Homology/Alignments : Family Browser (UCSC)ZNF708
Gene fusions - Rearrangements
Fusion : QuiverZNF708
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF708 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF708
dbVarZNF708
ClinVarZNF708
MonarchZNF708
1000_GenomesZNF708 
Exome Variant ServerZNF708
GNOMAD BrowserENSG00000182141
Varsome BrowserZNF708
ACMGZNF708 variants
VarityP17019
Genomic Variants (DGV)ZNF708 [DGVbeta]
DECIPHERZNF708 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF708 
Mutations
ICGC Data PortalZNF708 
TCGA Data PortalZNF708 
Broad Tumor PortalZNF708
OASIS PortalZNF708 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF708  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF708
Mutations and Diseases : HGMDZNF708
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF708
DgiDB (Drug Gene Interaction Database)ZNF708
DoCM (Curated mutations)ZNF708
CIViC (Clinical Interpretations of Variants in Cancer)ZNF708
Cancer3DZNF708
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF708
MedgenZNF708
Genetic Testing Registry ZNF708
NextProtP17019 [Medical]
GENETestsZNF708
Target ValidationZNF708
Huge Navigator ZNF708 [HugePedia]
ClinGenZNF708
Clinical trials, drugs, therapy
MyCancerGenomeZNF708
Protein Interactions : CTDZNF708
Pharm GKB GenePA37528
PharosP17019
Clinical trialZNF708
Miscellaneous
canSAR (ICR)ZNF708
HarmonizomeZNF708
ARCHS4ZNF708
DataMed IndexZNF708
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF708
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jan 20 14:00:22 CET 2022

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.