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ZNF708 (zinc finger protein 708)

Identity

Alias_namesZNF15
ZNF15L1
zinc finger protein 15-like 1 (KOX 8)
zinc finger protein 708
zinc finger protein 708 (KOX8)
Alias_symbol (synonym)KOX8
Other alias
HGNC (Hugo) ZNF708
LocusID (NCBI) 7562
Atlas_Id 76351
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21291160 and ends at 21329439 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF708 (19p12) / CYP46A1 (14q32.2)ZNF708 (19p12) / ILF3 (19p13.2)ZNF708 (19p12) / PTPRZ1 (7q31.32)
ZNF708 (19p12) / UBD (6p22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF708   12945
Cards
Entrez_Gene (NCBI)ZNF708  7562  zinc finger protein 708
AliasesKOX8; ZNF15; ZNF15L1
GeneCards (Weizmann)ZNF708
Ensembl hg19 (Hinxton)ENSG00000182141 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182141 [Gene_View]  chr19:21291160-21329439 [Contig_View]  ZNF708 [Vega]
ICGC DataPortalENSG00000182141
TCGA cBioPortalZNF708
AceView (NCBI)ZNF708
Genatlas (Paris)ZNF708
WikiGenes7562
SOURCE (Princeton)ZNF708
Genetics Home Reference (NIH)ZNF708
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF708  -     chr19:21291160-21329439 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF708  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblZNF708 - 19p12 [CytoView hg19]  ZNF708 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF708 [Mapview hg19]  ZNF708 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128184 AK131527 AK311130 BC039403 BC172244
RefSeq transcript (Entrez)NM_001297560 NM_001297561 NM_021269
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF708
Cluster EST : UnigeneHs.466296 [ NCBI ]
CGAP (NCI)Hs.466296
Alternative Splicing GalleryENSG00000182141
Gene ExpressionZNF708 [ NCBI-GEO ]   ZNF708 [ EBI - ARRAY_EXPRESS ]   ZNF708 [ SEEK ]   ZNF708 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF708 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7562
GTEX Portal (Tissue expression)ZNF708
Human Protein AtlasENSG00000182141-ZNF708 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP17019   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP17019  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP17019
Splice isoforms : SwissVarP17019
PhosPhoSitePlusP17019
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF708
DMDM Disease mutations7562
Blocks (Seattle)ZNF708
SuperfamilyP17019
Human Protein Atlas [tissue]ENSG00000182141-ZNF708 [tissue]
Peptide AtlasP17019
HPRD18322
IPIIPI00477192   
Protein Interaction databases
DIP (DOE-UCLA)P17019
IntAct (EBI)P17019
FunCoupENSG00000182141
BioGRIDZNF708
STRING (EMBL)ZNF708
ZODIACZNF708
Ontologies - Pathways
QuickGOP17019
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF708
Atlas of Cancer Signalling NetworkZNF708
Wikipedia pathwaysZNF708
Orthology - Evolution
OrthoDB7562
GeneTree (enSembl)ENSG00000182141
Phylogenetic Trees/Animal Genes : TreeFamZNF708
HOVERGENP17019
HOGENOMP17019
Homologs : HomoloGeneZNF708
Homology/Alignments : Family Browser (UCSC)ZNF708
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF708
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF708 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF708
dbVarZNF708
ClinVarZNF708
1000_GenomesZNF708 
Exome Variant ServerZNF708
ExAC (Exome Aggregation Consortium)ENSG00000182141
GNOMAD BrowserENSG00000182141
Genetic variants : HAPMAP7562
Genomic Variants (DGV)ZNF708 [DGVbeta]
DECIPHERZNF708 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF708 
Mutations
ICGC Data PortalZNF708 
TCGA Data PortalZNF708 
Broad Tumor PortalZNF708
OASIS PortalZNF708 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF708  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF708
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF708
DgiDB (Drug Gene Interaction Database)ZNF708
DoCM (Curated mutations)ZNF708 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF708 (select a term)
intoGenZNF708
Cancer3DZNF708(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF708
Genetic Testing Registry ZNF708
NextProtP17019 [Medical]
TSGene7562
GENETestsZNF708
Target ValidationZNF708
Huge Navigator ZNF708 [HugePedia]
snp3D : Map Gene to Disease7562
BioCentury BCIQZNF708
ClinGenZNF708
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7562
Chemical/Pharm GKB GenePA37528
Clinical trialZNF708
Miscellaneous
canSAR (ICR)ZNF708 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF708
EVEXZNF708
GoPubMedZNF708
iHOPZNF708
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:37:45 CET 2017

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