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ZNF710 (zinc finger protein 710)

Identity

Alias_symbol (synonym)DKFZp547K1113
FLJ37393
FLJ00306
Other alias-
HGNC (Hugo) ZNF710
LocusID (NCBI) 374655
Atlas_Id 76354
Location 15q26.1  [Link to chromosome band 15q26]
Location_base_pair Starts at 90001491 and ends at 90082200 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SEMA4B (15q26.1) / ZNF710 (15q26.1)TRIO (5p15.2) / ZNF710 (15q26.1)ZNF710 (15q26.1) / ZNF710 (15q26.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF710   25352
Cards
Entrez_Gene (NCBI)ZNF710  374655  zinc finger protein 710
Aliases
GeneCards (Weizmann)ZNF710
Ensembl hg19 (Hinxton)ENSG00000140548 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140548 [Gene_View]  chr15:90001491-90082200 [Contig_View]  ZNF710 [Vega]
ICGC DataPortalENSG00000140548
TCGA cBioPortalZNF710
AceView (NCBI)ZNF710
Genatlas (Paris)ZNF710
WikiGenes374655
SOURCE (Princeton)ZNF710
Genetics Home Reference (NIH)ZNF710
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF710  -     chr15:90001491-90082200 +  15q26.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF710  -     15q26.1   [Description]    (hg19-Feb_2009)
EnsemblZNF710 - 15q26.1 [CytoView hg19]  ZNF710 - 15q26.1 [CytoView hg38]
Mapping of homologs : NCBIZNF710 [Mapview hg19]  ZNF710 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094712 AK160373 AL831826 BC020301 BC126476
RefSeq transcript (Entrez)NM_198526
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF710
Cluster EST : UnigeneHs.459311 [ NCBI ]
CGAP (NCI)Hs.459311
Alternative Splicing GalleryENSG00000140548
Gene ExpressionZNF710 [ NCBI-GEO ]   ZNF710 [ EBI - ARRAY_EXPRESS ]   ZNF710 [ SEEK ]   ZNF710 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF710 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374655
GTEX Portal (Tissue expression)ZNF710
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N1W2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N1W2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N1W2
Splice isoforms : SwissVarQ8N1W2
PhosPhoSitePlusQ8N1W2
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam13912   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF710
DMDM Disease mutations374655
Blocks (Seattle)ZNF710
SuperfamilyQ8N1W2
Human Protein AtlasENSG00000140548
Peptide AtlasQ8N1W2
HPRD13329
IPIIPI00373803   IPI00852857   
Protein Interaction databases
DIP (DOE-UCLA)Q8N1W2
IntAct (EBI)Q8N1W2
FunCoupENSG00000140548
BioGRIDZNF710
STRING (EMBL)ZNF710
ZODIACZNF710
Ontologies - Pathways
QuickGOQ8N1W2
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF710
Atlas of Cancer Signalling NetworkZNF710
Wikipedia pathwaysZNF710
Orthology - Evolution
OrthoDB374655
GeneTree (enSembl)ENSG00000140548
Phylogenetic Trees/Animal Genes : TreeFamZNF710
HOVERGENQ8N1W2
HOGENOMQ8N1W2
Homologs : HomoloGeneZNF710
Homology/Alignments : Family Browser (UCSC)ZNF710
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF710 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF710
dbVarZNF710
ClinVarZNF710
1000_GenomesZNF710 
Exome Variant ServerZNF710
ExAC (Exome Aggregation Consortium)ZNF710 (select the gene name)
Genetic variants : HAPMAP374655
Genomic Variants (DGV)ZNF710 [DGVbeta]
DECIPHERZNF710 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF710 
Mutations
ICGC Data PortalZNF710 
TCGA Data PortalZNF710 
Broad Tumor PortalZNF710
OASIS PortalZNF710 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF710  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF710
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF710
DgiDB (Drug Gene Interaction Database)ZNF710
DoCM (Curated mutations)ZNF710 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF710 (select a term)
intoGenZNF710
Cancer3DZNF710(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF710
Genetic Testing Registry ZNF710
NextProtQ8N1W2 [Medical]
TSGene374655
GENETestsZNF710
Target ValidationZNF710
Huge Navigator ZNF710 [HugePedia]
snp3D : Map Gene to Disease374655
BioCentury BCIQZNF710
ClinGenZNF710
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374655
Chemical/Pharm GKB GenePA142670470
Clinical trialZNF710
Miscellaneous
canSAR (ICR)ZNF710 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF710
EVEXZNF710
GoPubMedZNF710
iHOPZNF710
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:13 CEST 2017

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