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ZNF711 (zinc finger protein 711)

Identity

Alias_namesZNF6
zinc finger protein 6 (CMPX1)
zinc finger protein 6
Alias_symbol (synonym)CMPX1
ZNF4
ZNF5
dJ75N13.1
Zfp711
MRX97
Other alias
HGNC (Hugo) ZNF711
LocusID (NCBI) 7552
Atlas_Id 76355
Location Xq21.1  [Link to chromosome band Xq21]
Location_base_pair Starts at 85243991 and ends at 85273362 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF711 (Xq21.1) / CREB5 (7p15.1)ZNF711 (Xq21.1) / GNAO1 (16q12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF711   13128
Cards
Entrez_Gene (NCBI)ZNF711  7552  zinc finger protein 711
AliasesCMPX1; MRX97; ZNF4; ZNF5; 
ZNF6; Zfp711; dJ75N13.1
GeneCards (Weizmann)ZNF711
Ensembl hg19 (Hinxton)ENSG00000147180 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147180 [Gene_View]  chrX:85243991-85273362 [Contig_View]  ZNF711 [Vega]
ICGC DataPortalENSG00000147180
TCGA cBioPortalZNF711
AceView (NCBI)ZNF711
Genatlas (Paris)ZNF711
WikiGenes7552
SOURCE (Princeton)ZNF711
Genetics Home Reference (NIH)ZNF711
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF711  -     chrX:85243991-85273362 +  Xq21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF711  -     Xq21.1   [Description]    (hg19-Feb_2009)
EnsemblZNF711 - Xq21.1 [CytoView hg19]  ZNF711 - Xq21.1 [CytoView hg38]
Mapping of homologs : NCBIZNF711 [Mapview hg19]  ZNF711 [Mapview hg38]
OMIM300803   314990   
Gene and transcription
Genbank (Entrez)AK294953 AK299604 AK299933 AK308097 AY726603
RefSeq transcript (Entrez)NM_001330574 NM_021998
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF711
Cluster EST : UnigeneHs.326801 [ NCBI ]
CGAP (NCI)Hs.326801
Alternative Splicing GalleryENSG00000147180
Gene ExpressionZNF711 [ NCBI-GEO ]   ZNF711 [ EBI - ARRAY_EXPRESS ]   ZNF711 [ SEEK ]   ZNF711 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF711 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7552
GTEX Portal (Tissue expression)ZNF711
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y462   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y462  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y462
Splice isoforms : SwissVarQ9Y462
PhosPhoSitePlusQ9Y462
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Transcrp_activ_Zfx/Zfy-dom    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    Zfx_Zfy_act (PF04704)   
Domain families : Pfam (NCBI)pfam00096    pfam04704   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF711
DMDM Disease mutations7552
Blocks (Seattle)ZNF711
SuperfamilyQ9Y462
Human Protein AtlasENSG00000147180
Peptide AtlasQ9Y462
HPRD02446
IPIIPI00657738   IPI00926174   IPI00433160   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y462
IntAct (EBI)Q9Y462
FunCoupENSG00000147180
BioGRIDZNF711
STRING (EMBL)ZNF711
ZODIACZNF711
Ontologies - Pathways
QuickGOQ9Y462
Ontology : AmiGOprotein binding  nucleus  transcription, DNA-templated  sequence-specific DNA binding  positive regulation of transcription, DNA-templated  metal ion binding  extracellular exosome  
Ontology : EGO-EBIprotein binding  nucleus  transcription, DNA-templated  sequence-specific DNA binding  positive regulation of transcription, DNA-templated  metal ion binding  extracellular exosome  
NDEx NetworkZNF711
Atlas of Cancer Signalling NetworkZNF711
Wikipedia pathwaysZNF711
Orthology - Evolution
OrthoDB7552
GeneTree (enSembl)ENSG00000147180
Phylogenetic Trees/Animal Genes : TreeFamZNF711
HOVERGENQ9Y462
HOGENOMQ9Y462
Homologs : HomoloGeneZNF711
Homology/Alignments : Family Browser (UCSC)ZNF711
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF711 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF711
dbVarZNF711
ClinVarZNF711
1000_GenomesZNF711 
Exome Variant ServerZNF711
ExAC (Exome Aggregation Consortium)ZNF711 (select the gene name)
Genetic variants : HAPMAP7552
Genomic Variants (DGV)ZNF711 [DGVbeta]
DECIPHERZNF711 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF711 
Mutations
ICGC Data PortalZNF711 
TCGA Data PortalZNF711 
Broad Tumor PortalZNF711
OASIS PortalZNF711 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF711  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF711
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ZNF711
DgiDB (Drug Gene Interaction Database)ZNF711
DoCM (Curated mutations)ZNF711 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF711 (select a term)
intoGenZNF711
Cancer3DZNF711(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300803    314990   
Orphanet3256   
MedgenZNF711
Genetic Testing Registry ZNF711
NextProtQ9Y462 [Medical]
TSGene7552
GENETestsZNF711
Huge Navigator ZNF711 [HugePedia]
snp3D : Map Gene to Disease7552
BioCentury BCIQZNF711
ClinGenZNF711
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7552
Chemical/Pharm GKB GenePA37702
Clinical trialZNF711
Miscellaneous
canSAR (ICR)ZNF711 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF711
EVEXZNF711
GoPubMedZNF711
iHOPZNF711
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:03:41 CEST 2017

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