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ZNF713 (zinc finger protein 713)

Identity

Alias_symbol (synonym)FLJ39963
Other alias-
HGNC (Hugo) ZNF713
LocusID (NCBI) 349075
Atlas_Id 76356
Location 7p11.2  [Link to chromosome band 7p11]
Location_base_pair Starts at 55887277 and ends at 55942226 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SPARCL1 (4q22.1) / ZNF713 (7p11.2)VOPP1 (7p11.2) / ZNF713 (7p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF713   22043
Cards
Entrez_Gene (NCBI)ZNF713  349075  zinc finger protein 713
Aliases
GeneCards (Weizmann)ZNF713
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:55887277-55942226 [Contig_View]  ZNF713 [Vega]
TCGA cBioPortalZNF713
AceView (NCBI)ZNF713
Genatlas (Paris)ZNF713
WikiGenes349075
SOURCE (Princeton)ZNF713
Genetics Home Reference (NIH)ZNF713
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF713  -     chr7:55887277-55942226 +  7p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF713  -     7p11.2   [Description]    (hg19-Feb_2009)
EnsemblZNF713 - 7p11.2 [CytoView hg19]  ZNF713 - 7p11.2 [CytoView hg38]
Mapping of homologs : NCBIZNF713 [Mapview hg19]  ZNF713 [Mapview hg38]
OMIM616181   
Gene and transcription
Genbank (Entrez)AI274573 AK097282 AL539604 BC048108 BC094796
RefSeq transcript (Entrez)NM_182633
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF713
Cluster EST : UnigeneHs.737301 [ NCBI ]
CGAP (NCI)Hs.737301
Gene ExpressionZNF713 [ NCBI-GEO ]   ZNF713 [ EBI - ARRAY_EXPRESS ]   ZNF713 [ SEEK ]   ZNF713 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF713 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)349075
GTEX Portal (Tissue expression)ZNF713
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N859   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N859  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N859
Splice isoforms : SwissVarQ8N859
PhosPhoSitePlusQ8N859
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF713
DMDM Disease mutations349075
Blocks (Seattle)ZNF713
SuperfamilyQ8N859
Peptide AtlasQ8N859
HPRD13440
IPIIPI00179405   IPI00925444   
Protein Interaction databases
DIP (DOE-UCLA)Q8N859
IntAct (EBI)Q8N859
BioGRIDZNF713
STRING (EMBL)ZNF713
ZODIACZNF713
Ontologies - Pathways
QuickGOQ8N859
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF713
Atlas of Cancer Signalling NetworkZNF713
Wikipedia pathwaysZNF713
Orthology - Evolution
OrthoDB349075
Phylogenetic Trees/Animal Genes : TreeFamZNF713
HOVERGENQ8N859
HOGENOMQ8N859
Homologs : HomoloGeneZNF713
Homology/Alignments : Family Browser (UCSC)ZNF713
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF713 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF713
dbVarZNF713
ClinVarZNF713
1000_GenomesZNF713 
Exome Variant ServerZNF713
ExAC (Exome Aggregation Consortium)ZNF713 (select the gene name)
Genetic variants : HAPMAP349075
Genomic Variants (DGV)ZNF713 [DGVbeta]
DECIPHERZNF713 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF713 
Mutations
ICGC Data PortalZNF713 
TCGA Data PortalZNF713 
Broad Tumor PortalZNF713
OASIS PortalZNF713 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF713  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF713
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF713
DgiDB (Drug Gene Interaction Database)ZNF713
DoCM (Curated mutations)ZNF713 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF713 (select a term)
intoGenZNF713
Cancer3DZNF713(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616181   
Orphanet
MedgenZNF713
Genetic Testing Registry ZNF713
NextProtQ8N859 [Medical]
TSGene349075
GENETestsZNF713
Target ValidationZNF713
Huge Navigator ZNF713 [HugePedia]
snp3D : Map Gene to Disease349075
BioCentury BCIQZNF713
ClinGenZNF713
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD349075
Chemical/Pharm GKB GenePA143485679
Clinical trialZNF713
Miscellaneous
canSAR (ICR)ZNF713 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF713
EVEXZNF713
GoPubMedZNF713
< hvef=../extdef.html#IHOP TARGET=IHOP>iHOPZNF713
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:13 CEST 2017

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