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ZNF714 (zinc finger protein 714)

Identity

Other alias-
HGNC (Hugo) ZNF714
LocusID (NCBI) 148206
Atlas_Id 54816
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21264953 and ends at 21307883 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MMP11 (22q11.23) / ZNF714 (19p12)ZNF714 (19p12) / SIGLECL1 (19q13.41)ZNF714 19p12 C19orf75

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)ZNF714   27124
Cards
Entrez_Gene (NCBI)ZNF714  148206  zinc finger protein 714
Aliases
GeneCards (Weizmann)ZNF714
Ensembl hg19 (Hinxton)ENSG00000160352 [Gene_View]  chr19:21264953-21307883 [Contig_View]  ZNF714 [Vega]
Ensembl hg38 (Hinxton)ENSG00000160352 [Gene_View]  chr19:21264953-21307883 [Contig_View]  ZNF714 [Vega]
ICGC DataPortalENSG00000160352
TCGA cBioPortalZNF714
AceView (NCBI)ZNF714
Genatlas (Paris)ZNF714
WikiGenes148206
SOURCE (Princeton)ZNF714
Genetics Home Reference (NIH)ZNF714
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF714  -     chr19:21264953-21307883 +  19p12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF714  -     19p12   [Description]    (hg38-Dec_2013)
EnsemblZNF714 - 19p12 [CytoView hg19]  ZNF714 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF714 [Mapview hg19]  ZNF714 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056006 AK090987 AK125662 BC022527 BC037782
RefSeq transcript (Entrez)NM_182515
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)ZNF714
Cluster EST : UnigeneHs.729186 [ NCBI ]
CGAP (NCI)Hs.729186
Alternative Splicing GalleryENSG00000160352
Gene ExpressionZNF714 [ NCBI-GEO ]   ZNF714 [ EBI - ARRAY_EXPRESS ]   ZNF714 [ SEEK ]   ZNF714 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF714 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148206
GTEX Portal (Tissue expression)ZNF714
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N38   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N38  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N38
Splice isoforms : SwissVarQ96N38
PhosPhoSitePlusQ96N38
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF714
DMDM Disease mutations148206
Blocks (Seattle)ZNF714
SuperfamilyQ96N38
Human Protein AtlasENSG00000160352
Peptide AtlasQ96N38
HPRD18733
IPIIPI00455381   IPI00646004   IPI00890787   IPI00941981   
Protein Interaction databases
DIP (DOE-UCLA)Q96N38
IntAct (EBI)Q96N38
FunCoupENSG00000160352
BioGRIDZNF714
STRING (EMBL)ZNF714
ZODIACZNF714
Ontologies - Pathways
QuickGOQ96N38
Ontology : AmiGORNA polymerase II core promoter proximal region sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIRNA polymerase II core promoter proximal region sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF714
Atlas of Cancer Signalling NetworkZNF714
Wikipedia pathwaysZNF714
Orthology - Evolution
OrthoDB148206
GeneTree (enSembl)ENSG00000160352
Phylogenetic Trees/Animal Genes : TreeFamZNF714
HOVERGENQ96N38
HOGENOMQ96N38
Homologs : HomoloGeneZNF714
Homology/Alignments : Family Browser (UCSC)ZNF714
Gene fusions - Rearrangements
Fusion : MitelmanMMP11/ZNF714 [22q11.23/19p12]  [t(19;22)(p12;q11)]  
Fusion : MitelmanZNF714/SIGLECL1 [19p12/19q13.41]  [t(19;19)(p12;q13)]  
Fusion: TCGAZNF714 19p12 C19orf75 LUSC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF714 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF714
dbVarZNF714
ClinVarZNF714
1000_GenomesZNF714 
Exome Variant ServerZNF714
ExAC (Exome Aggregation Consortium)ZNF714 (select the gene name)
Genetic variants : HAPMAP148206
Genomic Variants (DGV)ZNF714 [DGVbeta]
DECIPHER (Syndromes)19:21264953-21307883  ENSG00000160352
CONAN: Copy Number AnalysisZNF714 
Mutations
ICGC Data PortalZNF714 
TCGA Data PortalZNF714 
Broad Tumor PortalZNF714
OASIS PortalZNF714 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF714  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF714
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF714
DgiDB (Drug Gene Interaction Database)ZNF714
DoCM (Curated mutations)ZNF714 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF714 (select a term)
intoGenZNF714
Cancer3DZNF714(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF714
Genetic Testing Registry ZNF714
NextProtQ96N38 [Medical]
TSGene148206
GENETestsZNF714
Huge Navigator ZNF714 [HugePedia]
snp3D : Map Gene to Disease148206
BioCentury BCIQZNF714
ClinGenZNF714
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148206
Chemical/Pharm GKB GenePA143485680
Clinical trialZNF714
Miscellaneous
canSAR (ICR)ZNF714 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF714
EVEXZNF714
GoPubMedZNF714
iHOPZNF714
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:25:54 CEST 2017

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