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ZNF718 (zinc finger protein 718)

Identity

Alias (NCBI)-
HGNC (Hugo) ZNF718
HGNC Alias symbFLJ90036
LocusID (NCBI) 255403
Atlas_Id 76359
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 128121 and ends at 164159 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF718 (4p16.3) / LMO7 (13q22.2)ZNHIT6 (1p22.3) / ZNF718 (4p16.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF718   26889
Cards
Entrez_Gene (NCBI)ZNF718    zinc finger protein 718
Aliases
GeneCards (Weizmann)ZNF718
Ensembl hg19 (Hinxton)ENSG00000250312 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250312 [Gene_View]  ENSG00000250312 [Sequence]  chr4:128121-164159 [Contig_View]  ZNF718 [Vega]
ICGC DataPortalENSG00000250312
TCGA cBioPortalZNF718
AceView (NCBI)ZNF718
Genatlas (Paris)ZNF718
SOURCE (Princeton)ZNF718
Genetics Home Reference (NIH)ZNF718
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF718  -     chr4:128121-164159 +  4p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF718  -     4p16.3   [Description]    (hg19-Feb_2009)
GoldenPathZNF718 - 4p16.3 [CytoView hg19]  ZNF718 - 4p16.3 [CytoView hg38]
ImmunoBaseENSG00000250312
Genome Data Viewer NCBIZNF718 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI367791 AK074517 AK096662 AL833758 BC020836
RefSeq transcript (Entrez)NM_001039127 NM_001289930 NM_001289931
Consensus coding sequences : CCDS (NCBI)ZNF718
Gene ExpressionZNF718 [ NCBI-GEO ]   ZNF718 [ EBI - ARRAY_EXPRESS ]   ZNF718 [ SEEK ]   ZNF718 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF718 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF718 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)255403
GTEX Portal (Tissue expression)ZNF718
Human Protein AtlasENSG00000250312-ZNF718 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3SXZ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3SXZ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3SXZ3
PhosPhoSitePlusQ3SXZ3
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF718
SuperfamilyQ3SXZ3
AlphaFold pdb e-kbQ3SXZ3   
Human Protein Atlas [tissue]ENSG00000250312-ZNF718 [tissue]
HPRD08291
Protein Interaction databases
DIP (DOE-UCLA)Q3SXZ3
IntAct (EBI)Q3SXZ3
BioGRIDZNF718
STRING (EMBL)ZNF718
ZODIACZNF718
Ontologies - Pathways
QuickGOQ3SXZ3
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF718
Atlas of Cancer Signalling NetworkZNF718
Wikipedia pathwaysZNF718
Orthology - Evolution
OrthoDB255403
GeneTree (enSembl)ENSG00000250312
Phylogenetic Trees/Animal Genes : TreeFamZNF718
Homologs : HomoloGeneZNF718
Homology/Alignments : Family Browser (UCSC)ZNF718
Gene fusions - Rearrangements
Fusion : QuiverZNF718
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF718 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF718
dbVarZNF718
ClinVarZNF718
MonarchZNF718
1000_GenomesZNF718 
Exome Variant ServerZNF718
GNOMAD BrowserENSG00000250312
Varsome BrowserZNF718
ACMGZNF718 variants
VarityQ3SXZ3
Genomic Variants (DGV)ZNF718 [DGVbeta]
DECIPHERZNF718 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF718 
Mutations
ICGC Data PortalZNF718 
TCGA Data PortalZNF718 
Broad Tumor PortalZNF718
OASIS PortalZNF718 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF718  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF718
Mutations and Diseases : HGMDZNF718
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF718
DgiDB (Drug Gene Interaction Database)ZNF718
DoCM (Curated mutations)ZNF718
CIViC (Clinical Interpretations of Variants in Cancer)ZNF718
Cancer3DZNF718
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF718
MedgenZNF718
Genetic Testing Registry ZNF718
NextProtQ3SXZ3 [Medical]
GENETestsZNF718
Target ValidationZNF718
Huge Navigator ZNF718 [HugePedia]
ClinGenZNF718
Clinical trials, drugs, therapy
MyCancerGenomeZNF718
Protein Interactions : CTDZNF718
Pharm GKB GenePA143485682
PharosQ3SXZ3
Clinical trialZNF718
Miscellaneous
canSAR (ICR)ZNF718
HarmonizomeZNF718
DataMed IndexZNF718
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF718
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:30:19 CEST 2021

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