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ZNF718 (zinc finger protein 718)

Identity

Alias_symbol (synonym)FLJ90036
Other alias-
HGNC (Hugo) ZNF718
LocusID (NCBI) 255403
Atlas_Id 76359
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 124476 and ends at 164159 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF718 (4p16.3) / LMO7 (13q22.2)ZNHIT6 (1p22.3) / ZNF718 (4p16.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF718   26889
Cards
Entrez_Gene (NCBI)ZNF718  255403  zinc finger protein 718
Aliases
GeneCards (Weizmann)ZNF718
Ensembl hg19 (Hinxton)ENSG00000250312 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250312 [Gene_View]  chr4:124476-164159 [Contig_View]  ZNF718 [Vega]
ICGC DataPortalENSG00000250312
TCGA cBioPortalZNF718
AceView (NCBI)ZNF718
Genatlas (Paris)ZNF718
WikiGenes255403
SOURCE (Princeton)ZNF718
Genetics Home Reference (NIH)ZNF718
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF718  -     chr4:124476-164159 +  4p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF718  -     4p16.3   [Description]    (hg19-Feb_2009)
EnsemblZNF718 - 4p16.3 [CytoView hg19]  ZNF718 - 4p16.3 [CytoView hg38]
Mapping of homologs : NCBIZNF718 [Mapview hg19]  ZNF718 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI367791 AK074517 AK096662 AL833758 BC020836
RefSeq transcript (Entrez)NM_001039127 NM_001289930 NM_001289931
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF718
Cluster EST : UnigeneHs.745417 [ NCBI ]
CGAP (NCI)Hs.745417
Alternative Splicing GalleryENSG00000250312
Gene ExpressionZNF718 [ NCBI-GEO ]   ZNF718 [ EBI - ARRAY_EXPRESS ]   ZNF718 [ SEEK ]   ZNF718 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF718 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)255403
GTEX Portal (Tissue expression)ZNF718
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3SXZ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3SXZ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3SXZ3
Splice isoforms : SwissVarQ3SXZ3
PhosPhoSitePlusQ3SXZ3
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF718
DMDM Disease mutations255403
Blocks (Seattle)ZNF718
SuperfamilyQ3SXZ3
Human Protein AtlasENSG00000250312
Peptide AtlasQ3SXZ3
HPRD08291
IPIIPI00385567   
Protein Interaction databases
DIP (DOE-UCLA)Q3SXZ3
IntAct (EBI)Q3SXZ3
FunCoupENSG00000250312
BioGRIDZNF718
STRING (EMBL)ZNF718
ZODIACZNF718
Ontologies - Pathways
QuickGOQ3SXZ3
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF718
Atlas of Cancer Signalling NetworkZNF718
Wikipedia pathwaysZNF718
Orthology - Evolution
OrthoDB255403
GeneTree (enSembl)ENSG00000250312
Phylogenetic Trees/Animal Genes : TreeFamZNF718
HOVERGENQ3SXZ3
HOGENOMQ3SXZ3
Homologs : HomoloGeneZNF718
Homology/Alignments : Family Browser (UCSC)ZNF718
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF718 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF718
dbVarZNF718
ClinVarZNF718
1000_GenomesZNF718 
Exome Variant ServerZNF718
ExAC (Exome Aggregation Consortium)ZNF718 (select the gene name)
Genetic variants : HAPMAP255403
Genomic Variants (DGV)ZNF718 [DGVbeta]
DECIPHERZNF718 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF718 
Mutations
ICGC Data PortalZNF718 
TCGA Data PortalZNF718 
Broad Tumor PortalZNF718
OASIS PortalZNF718 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF718
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF718
DgiDB (Drug Gene Interaction Database)ZNF718
DoCM (Curated mutations)ZNF718 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF718 (select a term)
intoGenZNF718
Cancer3DZNF718(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF718
Genetic Testing Registry ZNF718
NextProtQ3SXZ3 [Medical]
TSGene255403
GENETestsZNF718
Target ValidationZNF718
Huge Navigator ZNF718 [HugePedia]
snp3D : Map Gene to Disease255403
BioCentury BCIQZNF718
ClinGenZNF718
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255403
Chemical/Pharm GKB GenePA143485682
Clinical trialZNF718
Miscellaneous
canSAR (ICR)ZNF718 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF718
EVEXZNF718
GoPubMedZNF718
iHOPZNF718
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:51:09 CEST 2017

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