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ZNF720 (zinc finger protein 720)

Identity

Other alias-
HGNC (Hugo) ZNF720
LocusID (NCBI) 124411
Atlas_Id 76360
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 31713229 and ends at 31761565 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BCL7C (16p11.2) / ZNF720 (16p11.2)ZNF720 (16p11.2) / SAP30L (5q33.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF720   26987
Cards
Entrez_Gene (NCBI)ZNF720  124411  zinc finger protein 720
Aliases
GeneCards (Weizmann)ZNF720
Ensembl hg19 (Hinxton)ENSG00000197302 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197302 [Gene_View]  chr16:31713229-31761565 [Contig_View]  ZNF720 [Vega]
ICGC DataPortalENSG00000197302
TCGA cBioPortalZNF720
AceView (NCBI)ZNF720
Genatlas (Paris)ZNF720
WikiGenes124411
SOURCE (Princeton)ZNF720
Genetics Home Reference (NIH)ZNF720
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF720  -     chr16:31713229-31761565 +  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF720  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblZNF720 - 16p11.2 [CytoView hg19]  ZNF720 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIZNF720 [Mapview hg19]  ZNF720 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128671 AK299345 AL832197 BC018134 BC055408
RefSeq transcript (Entrez)NM_001004300 NM_001130913
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF720
Cluster EST : UnigeneHs.528826 [ NCBI ]
CGAP (NCI)Hs.528826
Alternative Splicing GalleryENSG00000197302
Gene ExpressionZNF720 [ NCBI-GEO ]   ZNF720 [ EBI - ARRAY_EXPRESS ]   ZNF720 [ SEEK ]   ZNF720 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF720 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)124411
GTEX Portal (Tissue expression)ZNF720
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z2F6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z2F6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z2F6
Splice isoforms : SwissVarQ7Z2F6
PhosPhoSitePlusQ7Z2F6
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)   
Domains : Interpro (EBI)KRAB   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  
Conserved Domain (NCBI)ZNF720
DMDM Disease mutations124411
Blocks (Seattle)ZNF720
SuperfamilyQ7Z2F6
Human Protein AtlasENSG00000197302
Peptide AtlasQ7Z2F6
HPRD14026
IPIIPI00982526   IPI00443631   IPI00644370   IPI01009535   IPI00982708   IPI00980555   IPI01011649   IPI01012487   IPI01009993   IPI00788171   IPI01010360   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z2F6
IntAct (EBI)Q7Z2F6
FunCoupENSG00000197302
BioGRIDZNF720
STRING (EMBL)ZNF720
ZODIACZNF720
Ontologies - Pathways
QuickGOQ7Z2F6
Ontology : AmiGOnucleic acid binding  intracellular  regulation of transcription, DNA-templated  
Ontology : EGO-EBInucleic acid binding  intracellular  regulation of transcription, DNA-templated  
NDEx NetworkZNF720
Atlas of Cancer Signalling NetworkZNF720
Wikipedia pathwaysZNF720
Orthology - Evolution
OrthoDB124411
GeneTree (enSembl)ENSG00000197302
Phylogenetic Trees/Animal Genes : TreeFamZNF720
HOVERGENQ7Z2F6
HOGENOMQ7Z2F6
Homologs : HomoloGeneZNF720
Homology/Alignments : Family Browser (UCSC)ZNF720
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF720 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF720
dbVarZNF720
ClinVarZNF720
1000_GenomesZNF720 
Exome Variant ServerZNF720
ExAC (Exome Aggregation Consortium)ZNF720 (select the gene name)
Genetic variants : HAPMAP124411
Genomic Variants (DGV)ZNF720 [DGVbeta]
DECIPHERZNF720 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF720 
Mutations
ICGC Data PortalZNF720 
TCGA Data PortalZNF720 
Broad Tumor PortalZNF720
OASIS PortalZNF720 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF720  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF720
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF720
DgiDB (Drug Gene Interaction Database)ZNF720
DoCM (Curated mutations)ZNF720 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF720 (select a term)
intoGenZNF720
Cancer3DZNF720(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF720
Genetic Testing Registry ZNF720
NextProtQ7Z2F6 [Medical]
TSGene124411
GENETestsZNF720
Target ValidationZNF720
Huge Navigator ZNF720 [HugePedia]
snp3D : Map Gene to Disease124411
BioCentury BCIQZNF720
ClinGenZNF720
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD124411
Chemical/Pharm GKB GenePA143485683
Clinical trialZNF720
Miscellaneous
canSAR (ICR)ZNF720 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF720
EVEXZNF720
GoPubMedZNF720
iHOPZNF720
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:14 CEST 2017

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