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ZNF729 (zinc finger protein 729)

Identity

Alias (NCBI)-
HGNC (Hugo) ZNF729
LocusID (NCBI) 100287226
Atlas_Id 76366
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 22286441 and ends at 22317176 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF729   32464
Cards
Entrez_Gene (NCBI)ZNF729    zinc finger protein 729
Aliases
GeneCards (Weizmann)ZNF729
Ensembl hg19 (Hinxton)ENSG00000196350 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196350 [Gene_View]  ENSG00000196350 [Sequence]  chr19:22286441-22317176 [Contig_View]  ZNF729 [Vega]
ICGC DataPortalENSG00000196350
TCGA cBioPortalZNF729
AceView (NCBI)ZNF729
Genatlas (Paris)ZNF729
SOURCE (Princeton)ZNF729
Genetics Home Reference (NIH)ZNF729
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF729  -     chr19:22286441-22317176 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF729  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF729 - 19p12 [CytoView hg19]  ZNF729 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000196350
Genome Data Viewer NCBIZNF729 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BX956721
RefSeq transcript (Entrez)NM_001242680
Consensus coding sequences : CCDS (NCBI)ZNF729
Gene ExpressionZNF729 [ NCBI-GEO ]   ZNF729 [ EBI - ARRAY_EXPRESS ]   ZNF729 [ SEEK ]   ZNF729 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF729 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF729 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100287226
GTEX Portal (Tissue expression)ZNF729
Human Protein AtlasENSG00000196350-ZNF729 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NN14   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NN14  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NN14
PhosPhoSitePlusA6NN14
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF729
SuperfamilyA6NN14
AlphaFold pdb e-kbA6NN14   
Human Protein Atlas [tissue]ENSG00000196350-ZNF729 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)A6NN14
IntAct (EBI)A6NN14
BioGRIDZNF729
STRING (EMBL)ZNF729
ZODIACZNF729
Ontologies - Pathways
QuickGOA6NN14
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF729
Atlas of Cancer Signalling NetworkZNF729
Wikipedia pathwaysZNF729
Orthology - Evolution
OrthoDB100287226
GeneTree (enSembl)ENSG00000196350
Phylogenetic Trees/Animal Genes : TreeFamZNF729
Homologs : HomoloGeneZNF729
Homology/Alignments : Family Browser (UCSC)ZNF729
Gene fusions - Rearrangements
Fusion : QuiverZNF729
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF729 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF729
dbVarZNF729
ClinVarZNF729
MonarchZNF729
1000_GenomesZNF729 
Exome Variant ServerZNF729
GNOMAD BrowserENSG00000196350
Varsome BrowserZNF729
ACMGZNF729 variants
VarityA6NN14
Genomic Variants (DGV)ZNF729 [DGVbeta]
DECIPHERZNF729 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF729 
Mutations
ICGC Data PortalZNF729 
TCGA Data PortalZNF729 
Broad Tumor PortalZNF729
OASIS PortalZNF729 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF729  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF729
Mutations and Diseases : HGMDZNF729
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF729
DgiDB (Drug Gene Interaction Database)ZNF729
DoCM (Curated mutations)ZNF729
CIViC (Clinical Interpretations of Variants in Cancer)ZNF729
Cancer3DZNF729
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF729
MedgenZNF729
Genetic Testing Registry ZNF729
NextProtA6NN14 [Medical]
GENETestsZNF729
Target ValidationZNF729
Huge Navigator ZNF729 [HugePedia]
ClinGenZNF729
Clinical trials, drugs, therapy
MyCancerGenomeZNF729
Protein Interactions : CTDZNF729
Pharm GKB GenePA145149938
PharosA6NN14
Clinical trialZNF729
Miscellaneous
canSAR (ICR)ZNF729
HarmonizomeZNF729
ARCHS4ZNF729
DataMed IndexZNF729
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF729
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 14:00:25 CET 2022

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