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ZNF738 (zinc finger protein 738)

Identity

Other alias-
HGNC (Hugo) ZNF738
LocusID (NCBI) 148203
Atlas_Id 76373
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21358933 and ends at 21388582 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SSR2 (1q22) / ZNF738 (19p12)ZNF738 (19p12) / KIF1B (1p36.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF738   32469
Cards
Entrez_Gene (NCBI)ZNF738  148203  zinc finger protein 738
Aliases
GeneCards (Weizmann)ZNF738
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:21358933-21388582 [Contig_View]  ZNF738 [Vega]
TCGA cBioPortalZNF738
AceView (NCBI)ZNF738
Genatlas (Paris)ZNF738
WikiGenes148203
SOURCE (Princeton)ZNF738
Genetics Home Reference (NIH)ZNF738
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF738  -     chr19:21358933-21388582 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF738  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblZNF738 - 19p12 [CytoView hg19]  ZNF738 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF738 [Mapview hg19]  ZNF738 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA831708 AK027579 AK291002 AK291193 BC034499
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF738
Cluster EST : UnigeneHs.124384 [ NCBI ]
CGAP (NCI)Hs.124384
Gene ExpressionZNF738 [ NCBI-GEO ]   ZNF738 [ EBI - ARRAY_EXPRESS ]   ZNF738 [ SEEK ]   ZNF738 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF738 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148203
GTEX Portal (Tissue expression)ZNF738
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NE65   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NE65  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NE65
Splice isoforms : SwissVarQ8NE65
PhosPhoSitePlusQ8NE65
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)   
Domains : Interpro (EBI)KRAB   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  
Conserved Domain (NCBI)ZNF738
DMDM Disease mutations148203
Blocks (Seattle)ZNF738
SuperfamilyQ8NE65
Peptide AtlasQ8NE65
IPIIPI00168606   IPI00794596   
Protein Interaction databases
DIP (DOE-UCLA)Q8NE65
IntAct (EBI)Q8NE65
BioGRIDZNF738
STRING (EMBL)ZNF738
ZODIACZNF738
Ontologies - Pathways
QuickGOQ8NE65
Ontology : AmiGOprotein polyubiquitination  DNA binding  ubiquitin-protein transferase activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  
Ontology : EGO-EBIprotein polyubiquitination  DNA binding  ubiquitin-protein transferase activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  
NDEx NetworkZNF738
Atlas of Cancer Signalling NetworkZNF738
Wikipedia pathwaysZNF738
Orthology - Evolution
OrthoDB148203
Phylogenetic Trees/Animal Genes : TreeFamZNF738
HOVERGENQ8NE65
HOGENOMQ8NE65
Homologs : HomoloGeneZNF738
Homology/Alignments : Family Browser (UCSC)ZNF738
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF738 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF738
dbVarZNF738
ClinVarZNF738
1000_GenomesZNF738 
Exome Variant ServerZNF738
ExAC (Exome Aggregation Consortium)ZNF738 (select the gene name)
Genetic variants : HAPMAP148203
Genomic Variants (DGV)ZNF738 [DGVbeta]
DECIPHERZNF738 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF738 
Mutations
ICGC Data PortalZNF738 
TCGA Data PortalZNF738 
Broad Tumor PortalZNF738
OASIS PortalZNF738 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF738  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF738
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch ZNF738
DgiDB (Drug Gene Interaction Database)ZNF738
DoCM (Curated mutations)ZNF738 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF738 (select a term)
intoGenZNF738
Cancer3DZNF738(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF738
Genetic Testing Registry ZNF738
NextProtQ8NE65 [Medical]
TSGene148203
GENETestsZNF738
Target ValidationZNF738
Huge Navigator ZNF738 [HugePedia]
snp3D : Map Gene to Disease148203
BioCentury BCIQZNF738
ClinGenZNF738
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148203
Clinical trialZNF738
Miscellaneous
canSAR (ICR)ZNF738 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF738
EVEXZNF738
GoPubMedZNF738
iHOPZNF738
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:51:12 CEST 2017

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