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ZNF746 (zinc finger protein 746)

Identity

Alias_symbol (synonym)FLJ31413
PARIS
Other alias
HGNC (Hugo) ZNF746
LocusID (NCBI) 155061
Atlas_Id 54866
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 149472793 and ends at 149497807 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF746 (7q36.1) / SMIM3 (5q33.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF746   21948
Cards
Entrez_Gene (NCBI)ZNF746  155061  zinc finger protein 746
AliasesPARIS
GeneCards (Weizmann)ZNF746
Ensembl hg19 (Hinxton)ENSG00000181220 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181220 [Gene_View]  chr7:149472793-149497807 [Contig_View]  ZNF746 [Vega]
ICGC DataPortalENSG00000181220
TCGA cBioPortalZNF746
AceView (NCBI)ZNF746
Genatlas (Paris)ZNF746
WikiGenes155061
SOURCE (Princeton)ZNF746
Genetics Home Reference (NIH)ZNF746
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF746  -     chr7:149472793-149497807 -  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF746  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblZNF746 - 7q36.1 [CytoView hg19]  ZNF746 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIZNF746 [Mapview hg19]  ZNF746 [Mapview hg38]
OMIM613914   
Gene and transcription
Genbank (Entrez)AI991498 AK055975 AK128244 AK291814 BC031968
RefSeq transcript (Entrez)NM_001163474 NM_152557
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF746
Cluster EST : UnigeneHs.24643 [ NCBI ]
CGAP (NCI)Hs.24643
Alternative Splicing GalleryENSG00000181220
Gene ExpressionZNF746 [ NCBI-GEO ]   ZNF746 [ EBI - ARRAY_EXPRESS ]   ZNF746 [ SEEK ]   ZNF746 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF746 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)155061
GTEX Portal (Tissue expression)ZNF746
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NUN9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NUN9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NUN9
Splice isoforms : SwissVarQ6NUN9
PhosPhoSitePlusQ6NUN9
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)DUF3669_Znf    KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)DUF3669 (PF12417)    KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam12417    pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF746
DMDM Disease mutations155061
Blocks (Seattle)ZNF746
SuperfamilyQ6NUN9
Human Protein AtlasENSG00000181220
Peptide AtlasQ6NUN9
HPRD08099
IPIIPI00940207   IPI00071929   IPI01011016   IPI00945284   
Protein Interaction databases
DIP (DOE-UCLA)Q6NUN9
IntAct (EBI)Q6NUN9
FunCoupENSG00000181220
BioGRIDZNF746
STRING (EMBL)ZNF746
ZODIACZNF746
Ontologies - Pathways
QuickGOQ6NUN9
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II core promoter proximal region sequence-specific DNA binding  transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  cytoplasm  transcription, DNA-templated  ubiquitin protein ligase binding  transcription regulatory region DNA binding  negative regulation of transcription, DNA-templated  positive regulation of transcription from RNA polymerase II promoter  metal ion binding  positive regulation of neuron death  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II core promoter proximal region sequence-specific DNA binding  transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  cytoplasm  transcription, DNA-templated  ubiquitin protein ligase binding  transcription regulatory region DNA binding  negative regulation of transcription, DNA-templated  positive regulation of transcription from RNA polymerase II promoter  metal ion binding  positive regulation of neuron death  
NDEx NetworkZNF746
Atlas of Cancer Signalling NetworkZNF746
Wikipedia pathwaysZNF746
Orthology - Evolution
OrthoDB155061
GeneTree (enSembl)ENSG00000181220
Phylogenetic Trees/Animal Genes : TreeFamZNF746
HOVERGENQ6NUN9
HOGENOMQ6NUN9
Homologs : HomoloGeneZNF746
Homology/Alignments : Family Browser (UCSC)ZNF746
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF746 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF746
dbVarZNF746
ClinVarZNF746
1000_GenomesZNF746 
Exome Variant ServerZNF746
ExAC (Exome Aggregation Consortium)ZNF746 (select the gene name)
Genetic variants : HAPMAP155061
Genomic Variants (DGV)ZNF746 [DGVbeta]
DECIPHERZNF746 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF746 
Mutations
ICGC Data PortalZNF746 
TCGA Data PortalZNF746 
Broad Tumor PortalZNF746
OASIS PortalZNF746 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF746  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF746
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF746
DgiDB (Drug Gene Interaction Database)ZNF746
DoCM (Curated mutations)ZNF746 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF746 (select a term)
intoGenZNF746
Cancer3DZNF746(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613914   
Orphanet
MedgenZNF746
Genetic Testing Registry ZNF746
NextProtQ6NUN9 [Medical]
TSGene155061
GENETestsZNF746
Huge Navigator ZNF746 [HugePedia]
snp3D : Map Gene to Disease155061
BioCentury BCIQZNF746
ClinGenZNF746
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD155061
Chemical/Pharm GKB GenePA144596520
Clinical trialZNF746
Miscellaneous
canSAR (ICR)ZNF746 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF746
EVEXZNF746
GoPubMedZNF746
iHOPZNF746
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:45:10 CEST 2017

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