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ZNF75D (zinc finger protein 75D)

Identity

Alias_namesZNF82
ZNF75
zinc finger protein 75 (D8C6)
Alias_symbol (synonym)ZKSCAN24
D8C6
ZSCAN28
Other alias
HGNC (Hugo) ZNF75D
LocusID (NCBI) 7626
Atlas_Id 76378
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 135285787 and ends at 135296039 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF75D   13145
Cards
Entrez_Gene (NCBI)ZNF75D  7626  zinc finger protein 75D
AliasesD8C6; ZKSCAN24; ZNF75; ZNF82; 
ZSCAN28
GeneCards (Weizmann)ZNF75D
Ensembl hg19 (Hinxton)ENSG00000186376 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186376 [Gene_View]  chrX:135285787-135296039 [Contig_View]  ZNF75D [Vega]
ICGC DataPortalENSG00000186376
TCGA cBioPortalZNF75D
AceView (NCBI)ZNF75D
Genatlas (Paris)ZNF75D
WikiGenes7626
SOURCE (Princeton)ZNF75D
Genetics Home Reference (NIH)ZNF75D
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF75D  -     chrX:135285787-135296039 -  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF75D  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblZNF75D - Xq26.3 [CytoView hg19]  ZNF75D - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBIZNF75D [Mapview hg19]  ZNF75D [Mapview hg38]
OMIM314997   
Gene and transcription
Genbank (Entrez)AI264634 AK091687 AK092347 AK290215 AL831984
RefSeq transcript (Entrez)NM_001185063 NM_007131
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF75D
Cluster EST : UnigeneHs.736951 [ NCBI ]
CGAP (NCI)Hs.736951
Alternative Splicing GalleryENSG00000186376
Gene ExpressionZNF75D [ NCBI-GEO ]   ZNF75D [ EBI - ARRAY_EXPRESS ]   ZNF75D [ SEEK ]   ZNF75D [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF75D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7626
GTEX Portal (Tissue expression)ZNF75D
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51815   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP51815  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP51815
Splice isoforms : SwissVarP51815
PhosPhoSitePlusP51815
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    SCAN_BOX (PS50804)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Retrov_capsid_C    SCAN_dom    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    SCAN (PF02023)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam02023    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  SCAN (SM00431)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF75D
DMDM Disease mutations7626
Blocks (Seattle)ZNF75D
SuperfamilyP51815
Human Protein AtlasENSG00000186376
Peptide AtlasP51815
HPRD02448
IPIIPI00640326   IPI00643716   
Protein Interaction databases
DIP (DOE-UCLA)P51815
IntAct (EBI)P51815
FunCoupENSG00000186376
BioGRIDZNF75D
STRING (EMBL)ZNF75D
ZODIACZNF75D
Ontologies - Pathways
QuickGOP51815
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
NDEx NetworkZNF75D
Atlas of Cancer Signalling NetworkZNF75D
Wikipedia pathwaysZNF75D
Orthology - Evolution
OrthoDB7626
GeneTree (enSembl)ENSG00000186376
Phylogenetic Trees/Animal Genes : TreeFamZNF75D
HOVERGENP51815
HOGENOMP51815
Homologs : HomoloGeneZNF75D
Homology/Alignments : Family Browser (UCSC)ZNF75D
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF75D [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF75D
dbVarZNF75D
ClinVarZNF75D
1000_GenomesZNF75D 
Exome Variant ServerZNF75D
ExAC (Exome Aggregation Consortium)ZNF75D (select the gene name)
Genetic variants : HAPMAP7626
Genomic Variants (DGV)ZNF75D [DGVbeta]
DECIPHERZNF75D [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF75D 
Mutations
ICGC Data PortalZNF75D 
TCGA Data PortalZNF75D 
Broad Tumor PortalZNF75D
OASIS PortalZNF75D [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF75D  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF75D
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ZNF75D
DgiDB (Drug Gene Interaction Database)ZNF75D
DoCM (Curated mutations)ZNF75D (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF75D (select a term)
intoGenZNF75D
Cancer3DZNF75D(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM314997   
Orphanet
MedgenZNF75D
Genetic Testing Registry ZNF75D
NextProtP51815 [Medical]
TSGene7626
GENETestsZNF75D
Target ValidationZNF75D
Huge Navigator ZNF75D [HugePedia]
snp3D : Map Gene to Disease7626
BioCentury BCIQZNF75D
ClinGenZNF75D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7626
Chemical/Pharm GKB GenePA37719
Clinical trialZNF75D
Miscellaneous
canSAR (ICR)ZNF75D (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF75D
EVEXZNF75D
GoPubMedZNF75D
iHOPZNF75D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:17 CEST 2017

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