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ZNF76 (zinc finger protein 76)

Identity

Alias_namesD6S229E
zinc finger protein 76 (expressed in testis)
Alias_symbol (synonym)Zfp523
ZNF523
Other alias
HGNC (Hugo) ZNF76
LocusID (NCBI) 7629
Atlas_Id 76379
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 35259714 and ends at 35295987 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BCAT2 (19q13.33) / ZNF76 (6p21.31)SLC7A5 (16q24.2) / ZNF76 (6p21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF76   13149
Cards
Entrez_Gene (NCBI)ZNF76  7629  zinc finger protein 76
AliasesD6S229E; ZNF523; Zfp523
GeneCards (Weizmann)ZNF76
Ensembl hg19 (Hinxton)ENSG00000065029 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000065029 [Gene_View]  chr6:35259714-35295987 [Contig_View]  ZNF76 [Vega]
ICGC DataPortalENSG00000065029
TCGA cBioPortalZNF76
AceView (NCBI)ZNF76
Genatlas (Paris)ZNF76
WikiGenes7629
SOURCE (Princeton)ZNF76
Genetics Home Reference (NIH)ZNF76
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF76  -     chr6:35259714-35295987 +  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF76  -     6p21.31   [Description]    (hg19-Feb_2009)
EnsemblZNF76 - 6p21.31 [CytoView hg19]  ZNF76 - 6p21.31 [CytoView hg38]
Mapping of homologs : NCBIZNF76 [Mapview hg19]  ZNF76 [Mapview hg38]
OMIM194549   
Gene and transcription
Genbank (Entrez)AB208784 AK294605 AK295276 AK302903 AK304626
RefSeq transcript (Entrez)NM_001292032 NM_003427
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF76
Cluster EST : UnigeneHs.388024 [ NCBI ]
CGAP (NCI)Hs.388024
Alternative Splicing GalleryENSG00000065029
Gene ExpressionZNF76 [ NCBI-GEO ]   ZNF76 [ EBI - ARRAY_EXPRESS ]   ZNF76 [ SEEK ]   ZNF76 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF76 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7629
GTEX Portal (Tissue expression)ZNF76
Human Protein AtlasENSG00000065029-ZNF76 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP36508   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP36508  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP36508
Splice isoforms : SwissVarP36508
PhosPhoSitePlusP36508
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF76
DMDM Disease mutations7629
Blocks (Seattle)ZNF76
SuperfamilyP36508
Human Protein Atlas [tissue]ENSG00000065029-ZNF76 [tissue]
Peptide AtlasP36508
HPRD01929
IPIIPI00003784   IPI00218817   IPI00909270   IPI00922404   IPI00908455   IPI00556397   IPI01015000   IPI00984722   IPI01026399   IPI00947193   
Protein Interaction databases
DIP (DOE-UCLA)P36508
IntAct (EBI)P36508
FunCoupENSG00000065029
BioGRIDZNF76
STRING (EMBL)ZNF76
ZODIACZNF76
Ontologies - Pathways
QuickGOP36508
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  regulation of transcription from RNA polymerase III promoter  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  regulation of transcription from RNA polymerase III promoter  metal ion binding  
NDEx NetworkZNF76
Atlas of Cancer Signalling NetworkZNF76
Wikipedia pathwaysZNF76
Orthology - Evolution
OrthoDB7629
GeneTree (enSembl)ENSG00000065029
Phylogenetic Trees/Animal Genes : TreeFamZNF76
HOVERGENP36508
HOGENOMP36508
Homologs : HomoloGeneZNF76
Homology/Alignments : Family Browser (UCSC)ZNF76
Gene fusions - Rearrangements
Fusion : QuiverZNF76
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF76 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF76
dbVarZNF76
ClinVarZNF76
1000_GenomesZNF76 
Exome Variant ServerZNF76
ExAC (Exome Aggregation Consortium)ENSG00000065029
GNOMAD BrowserENSG00000065029
Genetic variants : HAPMAP7629
Genomic Variants (DGV)ZNF76 [DGVbeta]
DECIPHERZNF76 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF76 
Mutations
ICGC Data PortalZNF76 
TCGA Data PortalZNF76 
Broad Tumor PortalZNF76
OASIS PortalZNF76 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF76  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF76
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF76
DgiDB (Drug Gene Interaction Database)ZNF76
DoCM (Curated mutations)ZNF76 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF76 (select a term)
intoGenZNF76
Cancer3DZNF76(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194549   
Orphanet
DisGeNETZNF76
MedgenZNF76
Genetic Testing Registry ZNF76
NextProtP36508 [Medical]
TSGene7629
GENETestsZNF76
Target ValidationZNF76
Huge Navigator ZNF76 [HugePedia]
snp3D : Map Gene to Disease7629
BioCentury BCIQZNF76
ClinGenZNF76
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7629
Chemical/Pharm GKB GenePA37723
Clinical trialZNF76
Miscellaneous
canSAR (ICR)ZNF76 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF76
EVEXZNF76
GoPubMedZNF76
iHOPZNF76
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Feb 23 18:59:59 CET 2018

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