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ZNF765 (zinc finger protein 765)

Identity

Other alias-
HGNC (Hugo) ZNF765
LocusID (NCBI) 91661
Atlas_Id 76383
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53395133 and ends at 53412009 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF765 (19q13.42) / TPM3P9 (19q13.42)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF765   25092
Cards
Entrez_Gene (NCBI)ZNF765  91661  zinc finger protein 765
Aliases
GeneCards (Weizmann)ZNF765
Ensembl hg19 (Hinxton)ENSG00000196417 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196417 [Gene_View]  chr19:53395133-53412009 [Contig_View]  ZNF765 [Vega]
ICGC DataPortalENSG00000196417
TCGA cBioPortalZNF765
AceView (NCBI)ZNF765
Genatlas (Paris)ZNF765
WikiGenes91661
SOURCE (Princeton)ZNF765
Genetics Home Reference (NIH)ZNF765
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF765  -     chr19:53395133-53412009 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF765  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblZNF765 - 19q13.42 [CytoView hg19]  ZNF765 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIZNF765 [Mapview hg19]  ZNF765 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055464 AK293890 AK295840 AK316300 BC001610
RefSeq transcript (Entrez)NM_001040185 NM_001350495
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF765
Cluster EST : UnigeneHs.685640 [ NCBI ]
CGAP (NCI)Hs.685640
Alternative Splicing GalleryENSG00000196417
Gene ExpressionZNF765 [ NCBI-GEO ]   ZNF765 [ EBI - ARRAY_EXPRESS ]   ZNF765 [ SEEK ]   ZNF765 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF765 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91661
GTEX Portal (Tissue expression)ZNF765
Human Protein AtlasENSG00000196417-ZNF765 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L2R6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L2R6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L2R6
Splice isoforms : SwissVarQ7L2R6
PhosPhoSitePlusQ7L2R6
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF765
DMDM Disease mutations91661
Blocks (Seattle)ZNF765
SuperfamilyQ7L2R6
Human Protein Atlas [tissue]ENSG00000196417-ZNF765 [tissue]
Peptide AtlasQ7L2R6
HPRD14285
IPIIPI01013883   IPI00965780   IPI00964206   IPI00909265   
Protein Interaction databases
DIP (DOE-UCLA)Q7L2R6
IntAct (EBI)Q7L2R6
FunCoupENSG00000196417
BioGRIDZNF765
STRING (EMBL)ZNF765
ZODIACZNF765
Ontologies - Pathways
QuickGOQ7L2R6
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF765
Atlas of Cancer Signalling NetworkZNF765
Wikipedia pathwaysZNF765
Orthology - Evolution
OrthoDB91661
GeneTree (enSembl)ENSG00000196417
Phylogenetic Trees/Animal Genes : TreeFamZNF765
HOVERGENQ7L2R6
HOGENOMQ7L2R6
Homologs : HomoloGeneZNF765
Homology/Alignments : Family Browser (UCSC)ZNF765
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF765
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF765 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF765
dbVarZNF765
ClinVarZNF765
1000_GenomesZNF765 
Exome Variant ServerZNF765
ExAC (Exome Aggregation Consortium)ENSG00000196417
GNOMAD BrowserENSG00000196417
Genetic variants : HAPMAP91661
Genomic Variants (DGV)ZNF765 [DGVbeta]
DECIPHERZNF765 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF765 
Mutations
ICGC Data PortalZNF765 
TCGA Data PortalZNF765 
Broad Tumor PortalZNF765
OASIS PortalZNF765 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF765  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF765
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF765
DgiDB (Drug Gene Interaction Database)ZNF765
DoCM (Curated mutations)ZNF765 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF765 (select a term)
intoGenZNF765
Cancer3DZNF765(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF765
Genetic Testing Registry ZNF765
NextProtQ7L2R6 [Medical]
TSGene91661
GENETestsZNF765
Target ValidationZNF765
Huge Navigator ZNF765 [HugePedia]
snp3D : Map Gene to Disease91661
BioCentury BCIQZNF765
ClinGenZNF765
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91661
Chemical/Pharm GKB GenePA162410312
Clinical trialZNF765
Miscellaneous
canSAR (ICR)ZNF765 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF765
EVEXZNF765
GoPubMedZNF765
iHOPZNF765
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:37:53 CET 2017

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