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ZNF768 (zinc finger protein 768)

Identity

Alias_symbol (synonym)FLJ23436
Other alias-
HGNC (Hugo) ZNF768
LocusID (NCBI) 79724
Atlas_Id 55752
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 30524001 and ends at 30526589 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF768   26273
Cards
Entrez_Gene (NCBI)ZNF768  79724  zinc finger protein 768
Aliases
GeneCards (Weizmann)ZNF768
Ensembl hg19 (Hinxton)ENSG00000169957 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169957 [Gene_View]  chr16:30524001-30526589 [Contig_View]  ZNF768 [Vega]
ICGC DataPortalENSG00000169957
TCGA cBioPortalZNF768
AceView (NCBI)ZNF768
Genatlas (Paris)ZNF768
WikiGenes79724
SOURCE (Princeton)ZNF768
Genetics Home Reference (NIH)ZNF768
<-TH>Genomic and cartography
GoldenPath hg38 (UCSC)ZNF768  -     chr16:30524001-30526589 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF768  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblZNF768 - 16p11.2 [CytoView hg19]  ZNF768 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIZNF768 [Mapview hg19]  ZNF768 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK027089 AK295274 AK315449 BC013760 BC092403
RefSeq transcript (Entrez)NM_024671
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF768
Cluster EST : UnigeneHs.85658 [ NCBI ]
CGAP (NCI)Hs.85658
Alternative Splicing GalleryENSG00000169957
Gene ExpressionZNF768 [ NCBI-GEO ]   ZNF768 [ EBI - ARRAY_EXPRESS ]   ZNF768 [ SEEK ]   ZNF768 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF768 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79724
GTEX Portal (Tissue expression)ZNF768
Human Protein AtlasENSG00000169957-ZNF768 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H5H4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H5H4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H5H4
Splice isoforms : SwissVarQ9H5H4
PhosPhoSitePlusQ9H5H4
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)RNA_pol_II_repeat_euk    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)RNA_pol_Rpb1_R (PF05001)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam05001    pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF768
DMDM Disease mutations79724
Blocks (Seattle)ZNF768
SuperfamilyQ9H5H4
Human Protein Atlas [tissue]ENSG00000169957-ZNF768 [tissue]
Peptide AtlasQ9H5H4
HPRD08671
IPIIPI00747877   IPI00922939   
Protein Interaction databases
DIP (DOE-UCLA)Q9H5H4
IntAct (EBI)Q9H5H4
FunCoupENSG00000169957
BioGRIDZNF768
STRING (EMBL)ZNF768
ZODIACZNF768
Ontologies - Pathways
QuickGOQ9H5H4
Ontology : AmiGODNA binding  RNA binding  DNA-directed RNA polymerase II, core complex  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  metal ion binding  
Ontology : EGO-EBIDNA binding  RNA binding  DNA-directed RNA polymerase II, core complex  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  metal ion binding  
NDEx NetworkZNF768
Atlas of Cancer Signalling NetworkZNF768
Wikipedia pathwaysZNF768
Orthology - Evolution
OrthoDB79724
GeneTree (enSembl)ENSG00000169957
Phylogenetic Trees/Animal Genes : TreeFamZNF768
HOVERGENQ9H5H4
HOGENOMQ9H5H4
Homologs : HomoloGeneZNF768
Homology/Alignments : Family Browser (UCSC)ZNF768
Gene fusions - Rearrangements
a href=../extdef.html#FUS_TCGA2 TARGET=TCGA_Fusion>Tumor Fusion PortalZNF768
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF768 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF768
dbVarZNF768
ClinVarZNF768
1000_GenomesZNF768 
Exome Variant ServerZNF768
ExAC (Exome Aggregation Consortium)ENSG00000169957
GNOMAD BrowserENSG00000169957
Genetic variants : HAPMAP79724
Genomic Variants (DGV)ZNF768 [DGVbeta]
DECIPHERZNF768 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF768 
Mutations
ICGC Data PortalZNF768 
TCGA Data PortalZNF768 
Broad Tumor PortalZNF768
OASIS PortalZNF768 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF768  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF768
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF768
DgiDB (Drug Gene Interaction Database)ZNF768
DoCM (Curated mutations)ZNF768 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF768 (select a term)
intoGenZNF768
Cancer3DZNF768(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF768
MedgenZNF768
Genetic Testing Registry ZNF768
NextProtQ9H5H4 [Medical]
TSGene79724
GENETestsZNF768
Target ValidationZNF768
Huge Navigator ZNF768 [HugePedia]
snp3D : Map Gene to Disease79724
BioCentury BCIQZNF768
ClinGenZNF768
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79724
Chemical/Pharm GKB GenePA162410327
Clinical trialZNF768
Miscellaneous
canSAR (ICR)ZNF768 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF768
EVEXZNF768
GoPubMedZNF768
iHOPZNF768
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:42:45 CET 2017

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