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ZNF770 (zinc finger protein 770)

Identity

Alias (NCBI)PRO1914
HGNC (Hugo) ZNF770
HGNC Alias symbFLJ20582
PRO1914
LocusID (NCBI) 54989
Atlas_Id 76388
Location 15q14  [Link to chromosome band 15q14]
Location_base_pair Starts at 34978341 and ends at 34988287 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ADAM10 (15q21.3) / ZNF770 (15q14)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF770   26061
Cards
Entrez_Gene (NCBI)ZNF770    zinc finger protein 770
AliasesPRO1914
GeneCards (Weizmann)ZNF770
Ensembl hg19 (Hinxton)ENSG00000198146 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198146 [Gene_View]  ENSG00000198146 [Sequence]  chr15:34978341-34988287 [Contig_View]  ZNF770 [Vega]
ICGC DataPortalENSG00000198146
TCGA cBioPortalZNF770
AceView (NCBI)ZNF770
Genatlas (Paris)ZNF770
SOURCE (Princeton)ZNF770
Genetics Home Reference (NIH)ZNF770
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF770  -     chr15:34978341-34988287 -  15q14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF770  -     15q14   [Description]    (hg19-Feb_2009)
GoldenPathZNF770 - 15q14 [CytoView hg19]  ZNF770 - 15q14 [CytoView hg38]
ImmunoBaseENSG00000198146
Genome Data Viewer NCBIZNF770 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI031776 AI421027 AI890305 AK000589 AK127201
RefSeq transcript (Entrez)NM_014106
Consensus coding sequences : CCDS (NCBI)ZNF770
Gene ExpressionZNF770 [ NCBI-GEO ]   ZNF770 [ EBI - ARRAY_EXPRESS ]   ZNF770 [ SEEK ]   ZNF770 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF770 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF770 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54989
GTEX Portal (Tissue expression)ZNF770
Human Protein AtlasENSG00000198146-ZNF770 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IQ21   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IQ21  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IQ21
PhosPhoSitePlusQ6IQ21
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF770
SuperfamilyQ6IQ21
AlphaFold pdb e-kbQ6IQ21   
Human Protein Atlas [tissue]ENSG00000198146-ZNF770 [tissue]
HPRD16918
Protein Interaction databases
DIP (DOE-UCLA)Q6IQ21
IntAct (EBI)Q6IQ21
BioGRIDZNF770
STRING (EMBL)ZNF770
ZODIACZNF770
Ontologies - Pathways
QuickGOQ6IQ21
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF770
Atlas of Cancer Signalling NetworkZNF770
Wikipedia pathwaysZNF770
Orthology - Evolution
OrthoDB54989
GeneTree (enSembl)ENSG00000198146
Phylogenetic Trees/Animal Genes : TreeFamZNF770
Homologs : HomoloGeneZNF770
Homology/Alignments : Family Browser (UCSC)ZNF770
Gene fusions - Rearrangements
Fusion : QuiverZNF770
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF770 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF770
dbVarZNF770
ClinVarZNF770
MonarchZNF770
1000_GenomesZNF770 
Exome Variant ServerZNF770
GNOMAD BrowserENSG00000198146
Varsome BrowserZNF770
ACMGZNF770 variants
VarityQ6IQ21
Genomic Variants (DGV)ZNF770 [DGVbeta]
DECIPHERZNF770 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF770 
Mutations
ICGC Data PortalZNF770 
TCGA Data PortalZNF770 
Broad Tumor PortalZNF770
OASIS PortalZNF770 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF770  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF770
Mutations and Diseases : HGMDZNF770
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF770
DgiDB (Drug Gene Interaction Database)ZNF770
DoCM (Curated mutations)ZNF770
CIViC (Clinical Interpretations of Variants in Cancer)ZNF770
Cancer3DZNF770
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF770
MedgenZNF770
Genetic Testing Registry ZNF770
NextProtQ6IQ21 [Medical]
GENETestsZNF770
Target ValidationZNF770
Huge Navigator ZNF770 [HugePedia]
ClinGenZNF770
Clinical trials, drugs, therapy
MyCancerGenomeZNF770
Protein Interactions : CTDZNF770
Pharm GKB GenePA162410336
PharosQ6IQ21
Clinical trialZNF770
Miscellaneous
canSAR (ICR)ZNF770
HarmonizomeZNF770
DataMed IndexZNF770
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF770
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:30:26 CEST 2021

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