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ZNF774 (zinc finger protein 774)

Identity

Alias_symbol (synonym)MGC75360
Other alias-
HGNC (Hugo) ZNF774
LocusID (NCBI) 342132
Atlas_Id 76392
Location 15q26.1  [Link to chromosome band 15q26]
Location_base_pair Starts at 90352245 and ends at 90361483 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IQGAP1 (15q26.1) / ZNF774 (15q26.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF774   33108
Cards
Entrez_Gene (NCBI)ZNF774  342132  zinc finger protein 774
Aliases
GeneCards (Weizmann)ZNF774
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:90352245-90361483 [Contig_View]  ZNF774 [Vega]
TCGA cBioPortalZNF774
AceView (NCBI)ZNF774
Genatlas (Paris)ZNF774
WikiGenes342132
SOURCE (Princeton)ZNF774
Genetics Home Reference (NIH)ZNF774
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF774  -     chr15:90352245-90361483 +  15q26.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF774  -     15q26.1   [Description]    (hg19-Feb_2009)
EnsemblZNF774 - 15q26.1 [CytoView hg19]  ZNF774 - 15q26.1 [CytoView hg38]
Mapping of homologs : NCBIZNF774 [Mapview hg19]  ZNF774 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK289385 BC067279 CR749343 DA017564 HQ448186
RefSeq transcript (Entrez)NM_001004309
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF774
Cluster EST : UnigeneHs.55307 [ NCBI ]
CGAP (NCI)Hs.55307
Gene ExpressionZNF774 [ NCBI-GEO ]   ZNF774 [ EBI - ARRAY_EXPRESS ]   ZNF774 [ SEEK ]   ZNF774 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF774 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)342132
GTEX Portal (Tissue expression)ZNF774
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NX45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NX45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NX45
Splice isoforms : SwissVarQ6NX45
PhosPhoSitePlusQ6NX45
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)C2H2_Znf_fam    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF774
DMDM Disease mutations342132
Blocks (Seattle)ZNF774
SuperfamilyQ6NX45
Peptide AtlasQ6NX45
HPRD17571
IPIIPI00419842   IPI00470908   
Protein Interaction databases
DIP (DOE-UCLA)Q6NX45
IntAct (EBI)Q6NX45
BioGRIDZNF774
STRING (EMBL)ZNF774
ZODIACZNF774
Ontologies - Pathways
QuickGOQ6NX45
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF774
Atlas of Cancer Signalling NetworkZNF774
Wikipedia pathwaysZNF774
Orthology - Evolution
OrthoDB342132
Phylogenetic Trees/Animal Genes : TreeFamZNF774
HOVERGENQ6NX45
HOGENOMQ6NX45
Homologs : HomoloGeneZNF774
Homology/Alignments : Family Browser (UCSC)ZNF774
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF774
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF774 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF774
dbVarZNF774
ClinVarZNF774
1000_GenomesZNF774 
Exome Variant ServerZNF774
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP342132
Genomic Variants (DGV)ZNF774 [DGVbeta]
DECIPHERZNF774 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF774 
Mutations
ICGC Data PortalZNF774 
TCGA Data PortalZNF774 
Broad Tumor PortalZNF774
OASIS PortalZNF774 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF774  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF774
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF774
DgiDB (Drug Gene Interaction Database)ZNF774
DoCM (Curated mutations)ZNF774 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF774 (select a term)
intoGenZNF774
Cancer3DZNF774(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF774
Genetic Testing Registry ZNF774
NextProtQ6NX45 [Medical]
TSGene342132
GENETestsZNF774
Target ValidationZNF774
Huge Navigator ZNF774 [HugePedia]
snp3D : Map Gene to Disease342132
BioCentury BCIQZNF774
ClinGenZNF774
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD342132
Chemical/Pharm GKB GenePA162410358
Clinical trialZNF774
Miscellaneous
canSAR (ICR)ZNF774 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF774
EVEXZNF774
GoPubMedZNF774
iHOPZNF774
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:37:54 CET 2017

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