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ZNF776 (zinc finger protein 776)

Identity

Alias_symbol (synonym)FLJ38288
Other alias-
HGNC (Hugo) ZNF776
LocusID (NCBI) 284309
Atlas_Id 76394
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 57746796 and ends at 57758161 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DYNLRB1 (20q11.22) / ZNF776 (19q13.43)VPS29 (12q24.11) / ZNF776 (19q13.43)ZNF776 (19q13.43) / APLP2 (11q24.3)
ZNF776 (19q13.43) / NDRG4 (16q21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF776   26765
Cards
Entrez_Gene (NCBI)ZNF776  284309  zinc finger protein 776
Aliases
GeneCards (Weizmann)ZNF776
Ensembl hg19 (Hinxton)ENSG00000152443 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152443 [Gene_View]  chr19:57746796-57758161 [Contig_View]  ZNF776 [Vega]
ICGC DataPortalENSG00000152443
TCGA cBioPortalZNF776
AceView (NCBI)ZNF776
Genatlas (Paris)ZNF776
WikiGenes284309
SOURCE (Princeton)ZNF776
Genetics Home Reference (NIH)ZNF776
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF776  -     chr19:57746796-57758161 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF776  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblZNF776 - 19q13.43 [CytoView hg19]  ZNF776 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF776 [Mapview hg19]  ZNF776 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI446541 AK095607 AK127764 AK299680 BC136752
RefSeq transcript (Entrez)NM_001348007 NM_173632
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF776
Cluster EST : UnigeneHs.737521 [ NCBI ]
CGAP (NCI)Hs.737521
Alternative Splicing GalleryENSG00000152443
Gene ExpressionZNF776 [ NCBI-GEO ]   ZNF776 [ EBI - ARRAY_EXPRESS ]   ZNF776 [ SEEK ]   ZNF776 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF776 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284309
GTEX Portal (Tissue expression)ZNF776
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ68DI1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ68DI1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ68DI1
Splice isoforms : SwissVarQ68DI1
PhosPhoSitePlusQ68DI1
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF776
DMDM Disease mutations284309
Blocks (Seattle)ZNF776
SuperfamilyQ68DI1
Human Protein AtlasENSG00000152443
Peptide AtlasQ68DI1
HPRD08237
IPIIPI00418812   IPI00925480   IPI00924902   
Protein Interaction databases
DIP (DOE-UCLA)Q68DI1
IntAct (EBI)Q68DI1
FunCoupENSG00000152443
BioGRIDZNF776
STRING (EMBL)ZNF776
ZODIACZNF776
Ontologies - Pathways
QuickGOQ68DI1
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF776
Atlas of Cancer Signalling NetworkZNF776
Wikipedia pathwaysZNF776
Orthology - Evolution
OrthoDB284309
GeneTree (enSembl)ENSG00000152443
Phylogenetic Trees/Animal Genes : TreeFamZNF776
HOVERGENQ68DI1
HOGENOMQ68DI1
Homologs : HomoloGeneZNF776
Homology/Alignments : Family Browser (UCSC)ZNF776
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF776 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF776
dbVarZNF776
ClinVarZNF776
1000_GenomesZNF776 
Exome Variant ServerZNF776
ExAC (Exome Aggregation Consortium)ZNF776 (select the gene name)
Genetic variants : HAPMAP284309
Genomic Variants (DGV)ZNF776 [DGVbeta]
DECIPHERZNF776 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF776 
Mutations
ICGC Data PortalZNF776 
TCGA Data PortalZNF776 
Broad Tumor PortalZNF776
OASIS PortalZNF776 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF776  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF776
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF776
DgiDB (Drug Gene Interaction Database)ZNF776
DoCM (Curated mutations)ZNF776 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF776 (select a term)
intoGenZNF776
Cancer3DZNF776(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF776
Genetic Testing Registry ZNF776
NextProtQ68DI1 [Medical]
TSGene284309
GENETestsZNF776
Target ValidationZNF776
Huge Navigator ZNF776 [HugePedia]
snp3D : Map Gene to Disease284309
BioCentury BCIQZNF776
ClinGenZNF776
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284309
Chemical/Pharm GKB GenePA162410382
Clinical trialZNF776
Miscellaneous
canSAR (ICR)ZNF776 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF776
EVEXZNF776
GoPubMedZNF776
iHOPZNF776
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:51:18 CEST 2017

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