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ZNF781 (zinc finger protein 781)

Identity

Alias_symbol (synonym)FLJ37549
Other alias-
HGNC (Hugo) ZNF781
LocusID (NCBI) 163115
Atlas_Id 76399
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 37667749 and ends at 37692315 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF781   26745
Cards
Entrez_Gene (NCBI)ZNF781  163115  zinc finger protein 781
Aliases
GeneCards (Weizmann)ZNF781
Ensembl hg19 (Hinxton)ENSG00000196381 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196381 [Gene_View]  chr19:37667749-37692315 [Contig_View]  ZNF781 [Vega]
ICGC DataPortalENSG00000196381
TCGA cBioPortalZNF781
AceView (NCBI)ZNF781
Genatlas (Paris)ZNF781
WikiGenes163115
SOURCE (Princeton)ZNF781
Genetics Home Reference (NIH)ZNF781
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF781  -     chr19:37667749-37692315 -  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF781  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblZNF781 - 19q13.12 [CytoView hg19]  ZNF781 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIZNF781 [Mapview hg19]  ZNF781 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA778692 AK094868 AK097019 BC035681 BC108687
RefSeq transcript (Entrez)NM_152605
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF781
Cluster EST : UnigeneHs.722657 [ NCBI ]
CGAP (NCI)Hs.722657
Alternative Splicing GalleryENSG00000196381
Gene ExpressionZNF781 [ NCBI-GEO ]   ZNF781 [ EBI - ARRAY_EXPRESS ]   ZNF781 [ SEEK ]   ZNF781 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF781 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)163115
GTEX Portal (Tissue expression)ZNF781
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8C0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8C0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8C0
Splice isoforms : SwissVarQ8N8C0
PhosPhoSitePlusQ8N8C0
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF781
DMDM Disease mutations163115
Blocks (Seattle)ZNF781
SuperfamilyQ8N8C0
Human Protein AtlasENSG00000196381
Peptide AtlasQ8N8C0
HPRD08225
IPIIPI00853563   IPI01012362   IPI00167435   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8C0
IntAct (EBI)Q8N8C0
FunCoupENSG00000196381
BioGRIDZNF781
STRING (EMBL)ZNF781
ZODIACZNF781
Ontologies - Pathways
QuickGOQ8N8C0
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF781
Atlas of Cancer Signalling NetworkZNF781
Wikipedia pathwaysZNF781
Orthology - Evolution
OrthoDB163115
GeneTree (enSembl)ENSG00000196381
Phylogenetic Trees/Animal Genes : TreeFamZNF781
HOVERGENQ8N8C0
HOGENOMQ8N8C0
Homologs : HomoloGeneZNF781
Homology/Alignments : Family Browser (UCSC)ZNF781
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF781 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF781
dbVarZNF781
ClinVarZNF781
1000_GenomesZNF781 
Exome Variant ServerZNF781
ExAC (Exome Aggregation Consortium)ZNF781 (select the gene name)
Genetic variants : HAPMAP163115
Genomic Variants (DGV)ZNF781 [DGVbeta]
DECIPHERZNF781 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF781 
Mutations
ICGC Data PortalZNF781 
TCGA Data PortalZNF781 
Broad Tumor PortalZNF781
OASIS PortalZNF781 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF781  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF781
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF781
DgiDB (Drug Gene Interaction Database)ZNF781
DoCM (Curated mutations)ZNF781 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF781 (select a term)
intoGenZNF781
Cancer3DZNF781(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF781
Genetic Testing Registry ZNF781
NextProtQ8N8C0 [Medical]
TSGene163115
GENETestsZNF781
Target ValidationZNF781
Huge Navigator ZNF781 [HugePedia]
snp3D : Map Gene to Disease163115
BioCentury BCIQZNF781
ClinGenZNF781
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD163115
Chemical/Pharm GKB GenePA162410427
Clinical trialZNF781
Miscellaneous
canSAR (ICR)ZNF781 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF781
EVEXZNF781
GoPubMedZNF781
iHOPZNF781
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:51:19 CEST 2017

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