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ZNF783 (zinc finger family member 783)

Identity

Alias_symbol (synonym)DKFZp667J212
Other alias-
HGNC (Hugo) ZNF783
LocusID (NCBI) 100289678
Atlas_Id 76401
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 148959262 and ends at 148982085 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF783   27222
Cards
Entrez_Gene (NCBI)ZNF783  100289678  zinc finger family member 783
Aliases
GeneCards (Weizmann)ZNF783
Ensembl hg19 (Hinxton)ENSG00000204946 [Gene_View]  chr7:148959262-148982085 [Contig_View]  ZNF783 [Vega]
Ensembl hg38 (Hinxton)ENSG00000204946 [Gene_View]  chr7:148959262-148982085 [Contig_View]  ZNF783 [Vega]
ICGC DataPortalENSG00000204946
TCGA cBioPortalZNF783
AceView (NCBI)ZNF783
Genatlas (Paris)ZNF783
WikiGenes100289678
SOURCE (Princeton)ZNF783
Genetics Home Reference (NIH)ZNF783
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF783  -     chr7:148959262-148982085 +  7q36.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF783  -     7q36.1   [Description]    (hg38-Dec_2013)
EnsemblZNF783 - 7q36.1 [CytoView hg19]  ZNF783 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIZNF783 [Mapview hg19]  ZNF783 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022976 AL359620 BG029497 BX361979
RefSeq transcript (Entrez)NM_001195220
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)ZNF783
Cluster EST : UnigeneHs.490512 [ NCBI ]
CGAP (NCI)Hs.490512
Alternative Splicing GalleryENSG00000204946
Gene ExpressionZNF783 [ NCBI-GEO ]   ZNF783 [ EBI - ARRAY_EXPRESS ]   ZNF783 [ SEEK ]   ZNF783 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF783 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100289678
GTEX Portal (Tissue expression)ZNF783
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZMS7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZMS7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZMS7
Splice isoforms : SwissVarQ6ZMS7
PhosPhoSitePlusQ6ZMS7
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)   
Domains : Interpro (EBI)DUF3669_Znf    Krueppel-associated_box   
Domain families : Pfam (Sanger)DUF3669 (PF12417)    KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam12417    pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  
Conserved Domain (NCBI)ZNF783
DMDM Disease mutations100289678
Blocks (Seattle)ZNF783
SuperfamilyQ6ZMS7
Human Protein AtlasENSG00000204946
Peptide AtlasQ6ZMS7
IPIIPI00418421   IPI00910640   IPI00883616   IPI00936618   IPI00946016   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZMS7
IntAct (EBI)Q6ZMS7
FunCoupENSG00000204946
BioGRIDZNF783
STRING (EMBL)ZNF783
ZODIACZNF783
Ontologies - Pathways
QuickGOQ6ZMS7
Ontology : AmiGODNA binding  transcription cofactor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  
Ontology : EGO-EBIDNA binding  transcription cofactor activity  protein binding  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  
NDEx NetworkZNF783
Atlas of Cancer Signalling NetworkZNF783
Wikipedia pathwaysZNF783
Orthology - Evolution
OrthoDB100289678
GeneTree (enSembl)ENSG00000204946
Phylogenetic Trees/Animal Genes : TreeFamZNF783
HOVERGENQ6ZMS7
HOGENOMQ6ZMS7
Homologs : HomoloGeneZNF783
Homology/Alignments : Family Browser (UCSC)ZNF783
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF783 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF783
dbVarZNF783
ClinVarZNF783
1000_GenomesZNF783 
Exome Variant ServerZNF783
ExAC (Exome Aggregation Consortium)ZNF783 (select the gene name)
Genetic variants : HAPMAP100289678
Genomic Variants (DGV)ZNF783 [DGVbeta]
DECIPHER (Syndromes)7:148959262-148982085  ENSG00000204946
CONAN: Copy Number AnalysisZNF783 
Mutations
ICGC Data PortalZNF783 
TCGA Data PortalZNF783 
Broad Tumor PortalZNF783
OASIS PortalZNF783 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF783  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF783
BioMutasearch ZNF783
DgiDB (Drug Gene Interaction Database)ZNF783
DoCM (Curated mutations)ZNF783 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF783 (select a term)
intoGenZNF783
Cancer3DZNF783(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF783
Genetic Testing Registry ZNF783
NextProtQ6ZMS7 [Medical]
TSGene100289678
GENETestsZNF783
Huge Navigator ZNF783 [HugePedia]
snp3D : Map Gene to Disease100289678
BioCentury BCIQZNF783
ClinGenZNF783
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100289678
Clinical trialZNF783
Miscellaneous
canSAR (ICR)ZNF783 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF783
EVEXZNF783
GoPubMedZNF783
iHOPZNF783
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:53:53 CET 2017

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