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ZNF786 (zinc finger protein 786)

Identity

Alias_symbol (synonym)DKFZp762I137
Other alias-
HGNC (Hugo) ZNF786
LocusID (NCBI) 136051
Atlas_Id 76404
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 149069641 and ends at 149090777 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF786 (7q36.1) / DENND6B (22q13.33)ZNF786 (7q36.1) / LANCL2 (7p11.2)ZNF786 (7q36.1) / PRKAG2 (7q36.1)
ZNF786 (7q36.1) / ZNF786 (7q36.1)ZNF786 LANCL2ZNF786 FAM116B

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF786   21806
Cards
Entrez_Gene (NCBI)ZNF786  136051  zinc finger protein 786
Aliases
GeneCards (Weizmann)ZNF786
Ensembl hg19 (Hinxton)ENSG00000197362 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197362 [Gene_View]  chr7:149069641-149090777 [Contig_View]  ZNF786 [Vega]
ICGC DataPortalENSG00000197362
TCGA cBioPortalZNF786
AceView (NCBI)ZNF786
Genatlas (Paris)ZNF786
WikiGenes136051
SOURCE (Princeton)ZNF786
Genetics Home Reference (NIH)ZNF786
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF786  -     chr7:149069641-149090777 -  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF786  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblZNF786 - 7q36.1 [CytoView hg19]  ZNF786 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIZNF786 [Mapview hg19]  ZNF786 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095701 AK297472 AL834510 AM392873 AM392921
RefSeq transcript (Entrez)NM_152411
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF786
Cluster EST : UnigeneHs.729572 [ NCBI ]
CGAP (NCI)Hs.729572
Alternative Splicing GalleryENSG00000197362
Gene ExpressionZNF786 [ NCBI-GEO ]   ZNF786 [ EBI - ARRAY_EXPRESS ]   ZNF786 [ SEEK ]   ZNF786 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF786 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)136051
GTEX Portal (Tissue expression)ZNF786
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N393   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N393  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N393
Splice isoforms : SwissVarQ8N393
PhosPhoSitePlusQ8N393
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF786
DMDM Disease mutations136051
Blocks (Seattle)ZNF786
SuperfamilyQ8N393
Human Protein AtlasENSG00000197362
Peptide AtlasQ8N393
HPRD13232
IPIIPI00166521   IPI00945344   IPI01009518   
Protein Interaction databases
DIP (DOE-UCLA)Q8N393
IntAct (EBI)Q8N393
FunCoupENSG00000197362
BioGRIDZNF786
STRING (EMBL)ZNF786
ZODIACZNF786
Ontologies - Pathways
QuickGOQ8N393
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF786
Atlas of Cancer Signalling NetworkZNF786
Wikipedia pathwaysZNF786
Orthology - Evolution
OrthoDB136051
GeneTree (enSembl)ENSG00000197362
Phylogenetic Trees/Animal Genes : TreeFamZNF786
HOVERGENQ8N393
HOGENOMQ8N393
Homologs : HomoloGeneZNF786
Homology/Alignments : Family Browser (UCSC)ZNF786
Gene fusions - Rearrangements
Fusion: TCGAZNF786 LANCL2
Fusion: TCGAZNF786 FAM116B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF786 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF786
dbVarZNF786
ClinVarZNF786
1000_GenomesZNF786 
Exome Variant ServerZNF786
ExAC (Exome Aggregation Consortium)ZNF786 (select the gene name)
Genetic variants : HAPMAP136051
Genomic Variants (DGV)ZNF786 [DGVbeta]
DECIPHERZNF786 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF786 
Mutations
ICGC Data PortalZNF786 
TCGA Data PortalZNF786 
Broad Tumor PortalZNF786
OASIS PortalZNF786 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF786  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF786
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF786
DgiDB (Drug Gene Interaction Database)ZNF786
DoCM (Curated mutations)ZNF786 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF786 (select a term)
intoGenZNF786
Cancer3DZNF786(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF786
Genetic Testing Registry ZNF786
NextProtQ8N393 [Medical]
TSGene136051
GENETestsZNF786
Target ValidationZNF786
Huge Navigator ZNF786 [HugePedia]
snp3D : Map Gene to Disease136051
BioCentury BCIQZNF786
ClinGenZNF786
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD136051
Chemical/Pharm GKB GenePA162410468
Clinical trialZNF786
Miscellaneous
canSAR (ICR)ZNF786 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF786
EVEXZNF786
GoPubMedZNF786
iHOPZNF786
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:20 CEST 2017

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