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ZNF792 (zinc finger protein 792)

Identity

Alias_symbol (synonym)FLJ38451
Other alias-
HGNC (Hugo) ZNF792
LocusID (NCBI) 126375
Atlas_Id 76409
Location 19q13.11  [Link to chromosome band 19q13]
Location_base_pair Starts at 35447258 and ends at 35454953 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF792   24751
Cards
Entrez_Gene (NCBI)ZNF792  126375  zinc finger protein 792
Aliases
GeneCards (Weizmann)ZNF792
Ensembl hg19 (Hinxton)ENSG00000180884 [Gene_View]  chr19:35447258-35454953 [Contig_View]  ZNF792 [Vega]
Ensembl hg38 (Hinxton)ENSG00000180884 [Gene_View]  chr19:35447258-35454953 [Contig_View]  ZNF792 [Vega]
ICGC DataPortalENSG00000180884
TCGA cBioPortalZNF792
AceView (NCBI)ZNF792
Genatlas (Paris)ZNF792
WikiGenes126375
SOURCE (Princeton)ZNF792
Genetics Home Reference (NIH)ZNF792
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF792  -     chr19:35447258-35454953 -  19q13.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF792  -     19q13.11   [Description]    (hg38-Dec_2013)
EnsemblZNF792 - 19q13.11 [CytoView hg19]  ZNF792 - 19q13.11 [CytoView hg38]
Mapping of homologs : NCBIZNF792 [Mapview hg19]  ZNF792 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095770 AK130901 AK304550 AL517807 BC101118
RefSeq transcript (Entrez)NM_175872
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF792
Cluster EST : UnigeneHs.50405 [ NCBI ]
CGAP (NCI)Hs.50405
Alternative Splicing GalleryENSG00000180884
Gene ExpressionZNF792 [ NCBI-GEO ]   ZNF792 [ EBI - ARRAY_EXPRESS ]   ZNF792 [ SEEK ]   ZNF792 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF792 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126375
GTEX Portal (Tissue expression)ZNF792
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3KQV3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3KQV3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3KQV3
Splice isoforms : SwissVarQ3KQV3
PhosPhoSitePlusQ3KQV3
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF792
DMDM Disease mutations126375
Blocks (Seattle)ZNF792
SuperfamilyQ3KQV3
Human Protein AtlasENSG00000180884
Peptide AtlasQ3KQV3
HPRD13430
IPIIPI00879717   IPI00797058   
Protein Interaction databases
DIP (DOE-UCLA)Q3KQV3
IntAct (EBI)Q3KQV3
FunCoupENSG00000180884
BioGRIDZNF792
STRING (EMBL)ZNF792
ZODIACZNF792
Ontologies - Pathways
QuickGOQ3KQV3
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF792
Atlas of Cancer Signalling NetworkZNF792
Wikipedia pathwaysZNF792
Orthology - Evolution
OrthoDB126375
GeneTree (enSembl)ENSG00000180884
Phylogenetic Trees/Animal Genes : TreeFamZNF792
HOVERGENQ3KQV3
HOGENOMQ3KQV3
Homologs : HomoloGeneZNF792
Homology/Alignments : Family Browser (UCSC)ZNF792
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF792 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF792
dbVarZNF792
ClinVarZNF792
1000_GenomesZNF792 
Exome Variant ServerZNF792
ExAC (Exome Aggregation Consortium)ZNF792 (select the gene name)
Genetic variants : HAPMAP126375
Genomic Variants (DGV)ZNF792 [DGVbeta]
DECIPHER (Syndromes)19:35447258-35454953  ENSG00000180884
CONAN: Copy Number AnalysisZNF792 
Mutations
ICGC Data PortalZNF792 
TCGA Data PortalZNF792 
Broad Tumor PortalZNF792
OASIS PortalZNF792 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF792  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF792
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF792
DgiDB (Drug Gene Interaction Database)ZNF792
DoCM (Curated mutations)ZNF792 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF792 (select a term)
intoGenZNF792
Cancer3DZNF792(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF792
Genetic Testing Registry ZNF792
NextProtQ3KQV3 [Medical]
TSGene126375
GENETestsZNF792
Huge Navigator ZNF792 [HugePedia]
snp3D : Map Gene to Disease126375
BioCentury BCIQZNF792
ClinGenZNF792
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126375
Chemical/Pharm GKB GenePA162410535
Clinical trialZNF792
Miscellaneous
canSAR (ICR)ZNF792 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF792
EVEXZNF792
GoPubMedZNF792
iHOPZNF792
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:55 CET 2017

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