Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZNF805 (zinc finger protein 805)

Identity

Other alias-
HGNC (Hugo) ZNF805
LocusID (NCBI) 390980
Atlas_Id 76418
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 57752053 and ends at 57774106 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ZNF805 (19q13.43) / ETFB (19q13.41)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF805   23272
Cards
Entrez_Gene (NCBI)ZNF805  390980  zinc finger protein 805
Aliases
GeneCards (Weizmann)ZNF805
Ensembl hg19 (Hinxton) [Gene_View]  chr19:57752053-57774106 [Contig_View]  ZNF805 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:57752053-57774106 [Contig_View]  ZNF805 [Vega]
TCGA cBioPortalZNF805
AceView (NCBI)ZNF805
Genatlas (Paris)ZNF805
WikiGenes390980
SOURCE (Princeton)ZNF805
Genetics Home Reference (NIH)ZNF805
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF805  -     chr19:57752053-57774106 +  19q13.43   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF805  -     19q13.43   [Description]    (hg38-Dec_2013)
EnsemblZNF805 - 19q13.43 [CytoView hg19]  ZNF805 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF805 [Mapview hg19]  ZNF805 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF024708 AK297977 BC140786 CR936617 HG511089
RefSeq transcript (Entrez)NM_001023563 NM_001145078
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF805
Cluster EST : UnigeneHs.22488 [ NCBI ]
CGAP (NCI)Hs.22488
Gene ExpressionZNF805 [ NCBI-GEO ]   ZNF805 [ EBI - ARRAY_EXPRESS ]   ZNF805 [ SEEK ]   ZNF805 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF805 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390980
GTEX Portal (Tissue expression)ZNF805
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5CZA5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5CZA5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5CZA5
Splice isoforms : SwissVarQ5CZA5
PhosPhoSitePlusQ5CZA5
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF805
DMDM Disease mutations390980
Blocks (Seattle)ZNF805
SuperfamilyQ5CZA5
Peptide AtlasQ5CZA5
HPRD18617
IPIIPI00397000   IPI00920950   IPI01011048   
Protein Interaction databases
DIP (DOE-UCLA)Q5CZA5
IntAct (EBI)Q5CZA5
BioGRIDZNF805
STRING (EMBL)ZNF805
ZODIACZNF805
Ontologies - Pathways
QuickGOQ5CZA5
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF805
Atlas of Cancer Signalling NetworkZNF805
Wikipedia pathwaysZNF805
Orthology - Evolution
OrthoDB390980
Phylogenetic Trees/Animal Genes : TreeFamZNF805
HOVERGENQ5CZA5
HOGENOMQ5CZA5
Homologs : HomoloGeneZNF805
Homology/Alignments : Family Browser (UCSC)ZNF805
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF805 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF805
dbVarZNF805
ClinVarZNF805
1000_GenomesZNF805 
Exome Variant ServerZNF805
ExAC (Exome Aggregation Consortium)ZNF805 (select the gene name)
Genetic variants : HAPMAP390980
Genomic Variants (DGV)ZNF805 [DGVbeta]
DECIPHER (Syndromes)19:57752053-57774106  
CONAN: Copy Number AnalysisZNF805 
Mutations
ICGC Data PortalZNF805 
TCGA Data PortalZNF805 
Broad Tumor PortalZNF805
OASIS PortalZNF805 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF805  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF805
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF805
DgiDB (Drug Gene Interaction Database)ZNF805
DoCM (Curated mutations)ZNF805 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF805 (select a term)
intoGenZNF805
Cancer3DZNF805(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF805
Genetic Testing Registry ZNF805
NextProtQ5CZA5 [Medical]
TSGene390980
GENETestsZNF805
Huge Navigator ZNF805 [HugePedia]
snp3D : Map Gene to Disease390980
BioCentury BCIQZNF805
ClinGenZNF805
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390980
Chemical/Pharm GKB GenePA162410601
Clinical trialZNF805
Miscellaneous
canSAR (ICR)ZNF805 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF805
EVEXZNF805
GoPubMedZNF805
iHOPZNF805
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:53:57 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.