Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF806 (zinc finger protein 806)

Identity

Other alias-
HGNC (Hugo) ZNF806
LocusID (NCBI) 646915
Atlas_Id 77025
Location 2q21.2  [Link to chromosome band 2q21]
Location_base_pair Starts at 132307144 and ends at 132318747 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF806   33228
Cards
Entrez_Gene (NCBI)ZNF806  646915  zinc finger protein 806
Aliases
GeneCards (Weizmann)ZNF806
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:132307144-132318747 [Contig_View]  ZNF806 [Vega]
TCGA cBioPortalZNF806
AceView (NCBI)ZNF806
Genatlas (Paris)ZNF806
WikiGenes646915
SOURCE (Princeton)ZNF806
Genetics Home Reference (NIH)ZNF806
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF806  -     chr2:132307144-132318747 +  2q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF806  -     2q21.2   [Description]    (hg19-Feb_2009)
EnsemblZNF806 - 2q21.2 [CytoView hg19]  ZNF806 - 2q21.2 [CytoView hg38]
Mapping of homologs : NCBIZNF806 [Mapview hg19]  ZNF806 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001304449
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF806
Gene ExpressionZNF806 [ NCBI-GEO ]   ZNF806 [ EBI - ARRAY_EXPRESS ]   ZNF806 [ SEEK ]   ZNF806 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF806 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646915
GTEX Portal (Tissue expression)ZNF806
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C7X5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C7X5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C7X5
Splice isoforms : SwissVarP0C7X5
PhosPhoSitePlusP0C7X5
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF806
DMDM Disease mutations646915
Blocks (Seattle)ZNF806
SuperfamilyP0C7X5
Peptide AtlasP0C7X5
IPIIPI00888830   IPI00937201   
Protein Interaction databases
DIP (DOE-UCLA)P0C7X5
IntAct (EBI)P0C7X5
BioGRIDZNF806
STRING (EMBL)ZNF806
ZODIACZNF806
Ontologies - Pathways
QuickGOP0C7X5
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF806
Atlas of Cancer Signalling NetworkZNF806
Wikipedia pathwaysZNF806
Orthology - Evolution
OrthoDB646915
Phylogenetic Trees/Animal Genes : TreeFamZNF806
HOVERGENP0C7X5
HOGENOMP0C7X5
Homologs : HomoloGeneZNF806
Homology/Alignments : Family Browser (UCSC)ZNF806
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF806
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF806 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF806
dbVarZNF806
ClinVarZNF806
1000_GenomesZNF806 
Exome Variant ServerZNF806
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP646915
Genomic Variants (DGV)ZNF806 [DGVbeta]
DECIPHERZNF806 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF806 
Mutations
ICGC Data PortalZNF806 
TCGA Data PortalZNF806 
Broad Tumor PortalZNF806
OASIS PortalZNF806 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF806
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF806
DgiDB (Drug Gene Interaction Database)ZNF806
DoCM (Curated mutations)ZNF806 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF806 (select a term)
intoGenZNF806
Cancer3DZNF806(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF806
Genetic Testing Registry ZNF806
NextProtP0C7X5 [Medical]
TSGene646915
GENETestsZNF806
Target ValidationZNF806
Huge Navigator ZNF806 [HugePedia]
snp3D : Map Gene to Disease646915
BioCentury BCIQZNF806
ClinGenZNF806
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646915
Chemical/Pharm GKB GenePA162410613
Clinical trialZNF806
Miscellaneous
canSAR (ICR)ZNF806 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF806
EVEXZNF806
GoPubMedZNF806
iHOPZNF806
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:38:00 CET 2017

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