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ZNF81 (zinc finger protein 81)

Identity

Alias_namesMRX45
zinc finger protein 81 (HFZ20)
mental retardation, X-linked 45
Alias_symbol (synonym)HFZ20
Other aliasdJ54B20.6
HGNC (Hugo) ZNF81
LocusID (NCBI) 347344
Atlas_Id 76420
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 47836902 and ends at 47922256 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF81 (Xp11.23) / NDUFA4 (7p21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF81   13156
Cards
Entrez_Gene (NCBI)ZNF81  347344  zinc finger protein 81
AliasesHFZ20; MRX45; dJ54B20.6
GeneCards (Weizmann)ZNF81
Ensembl hg19 (Hinxton)ENSG00000197779 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197779 [Gene_View]  chrX:47836902-47922256 [Contig_View]  ZNF81 [Vega]
ICGC DataPortalENSG00000197779
TCGA cBioPortalZNF81
AceView (NCBI)ZNF81
Genatlas (Paris)ZNF81
WikiGenes347344
SOURCE (Princeton)ZNF81
Genetics Home Reference (NIH)ZNF81
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF81  -     chrX:47836902-47922256 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF81  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblZNF81 - Xp11.23 [CytoView hg19]  ZNF81 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIZNF81 [Mapview hg19]  ZNF81 [Mapview hg38]
OMIM300498   314998   
Gene and transcription
Genbank (Entrez)AK026716 AK126339 AK126949 AY487248 BC039609
RefSeq transcript (Entrez)NM_007137
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF81
Cluster EST : UnigeneHs.710432 [ NCBI ]
CGAP (NCI)Hs.710432
Alternative Splicing GalleryENSG00000197779
Gene ExpressionZNF81 [ NCBI-GEO ]   ZNF81 [ EBI - ARRAY_EXPRESS ]   ZNF81 [ SEEK ]   ZNF81 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF81 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)347344
GTEX Portal (Tissue expression)ZNF81
Human Protein AtlasENSG00000197779-ZNF81 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51508   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP51508  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP51508
Splice isoforms : SwissVarP51508
PhosPhoSitePlusP51508
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF81
DMDM Disease mutations347344
Blocks (Seattle)ZNF81
SuperfamilyP51508
Human Protein Atlas [tissue]ENSG00000197779-ZNF81 [tissue]
Peptide AtlasP51508
IPIIPI00293409   IPI01010207   IPI00552202   IPI00552949   
Protein Interaction databases
DIP (DOE-UCLA)P51508
IntAct (EBI)P51508
FunCoupENSG00000197779
BioGRIDZNF81
STRING (EMBL)ZNF81
ZODIACZNF81
Ontologies - Pathways
QuickGOP51508
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF81
Atlas of Cancer Signalling NetworkZNF81
Wikipedia pathwaysZNF81
Orthology - Evolution
OrthoDB347344
GeneTree (enSembl)ENSG00000197779
Phylogenetic Trees/Animal Genes : TreeFamZNF81
HOVERGENP51508
HOGENOMP51508
Homologs : HomoloGeneZNF81
Homology/Alignments : Family Browser (UCSC)ZNF81
Gene fusions - Rearrangements
Tumor Fusion PortalZNF81
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF81 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF81
dbVarZNF81
ClinVarZNF81
1000_GenomesZNF81 
Exome Variant ServerZNF81
ExAC (Exome Aggregation Consortium)ENSG00000197779
GNOMAD BrowserENSG00000197779
Genetic variants : HAPMAP347344
Genomic Variants (DGV)ZNF81 [DGVbeta]
DECIPHERZNF81 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF81 
Mutations
ICGC Data PortalZNF81 
TCGA Data PortalZNF81 
Broad Tumor PortalZNF81
OASIS PortalZNF81 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF81  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF81
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ZNF81
DgiDB (Drug Gene Interaction Database)ZNF81
DoCM (Curated mutations)ZNF81 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF81 (select a term)
intoGenZNF81
Cancer3DZNF81(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300498    314998   
Orphanet3256   
DisGeNETZNF81
MedgenZNF81
Genetic Testing Registry ZNF81
NextProtP51508 [Medical]
TSGene347344
GENETestsZNF81
Target ValidationZNF81
Huge Navigator ZNF81 [HugePedia]
snp3D : Map Gene to Disease347344
BioCentury BCIQZNF81
ClinGenZNF81
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD347344
Chemical/Pharm GKB GenePA37730
Clinical trialZNF81
Miscellaneous
canSAR (ICR)ZNF81 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF81
EVEXZNF81
GoPubMedZNF81
iHOPZNF81
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:01:00 CET 2017

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