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ZNF818P (zinc finger protein 818, pseudogene)

Identity

Alias_namesZNF818
zinc finger protein 818
zinc finger protein 818 pseudogene
zinc finger protein 818 (pseudogene)
Alias_symbol (synonym)FLJ46385
Other alias
HGNC (Hugo) ZNF818P
LocusID (NCBI) 390963
Atlas_Id 76427
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53212975 and ends at 53216095 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF818P   33265
Cards
Entrez_Gene (NCBI)ZNF818P  390963  zinc finger protein 818, pseudogene
AliasesZNF818
GeneCards (Weizmann)ZNF818P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:53212975-53216095 [Contig_View]  ZNF818P [Vega]
TCGA cBioPortalZNF818P
AceView (NCBI)ZNF818P
Genatlas (Paris)ZNF818P
WikiGenes390963
SOURCE (Princeton)ZNF818P
Genetics Home Reference (NIH)ZNF818P
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF818P  -     chr19:53212975-53216095 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF818P  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblZNF818P - 19q13.42 [CytoView hg19]  ZNF818P - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIZNF818P [Mapview hg19]  ZNF818P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128250 BF908632 BG759674 GD137562
RefSeq transcript (Entrez)NM_001001675
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF818P
Cluster EST : UnigeneHs.444446 [ NCBI ]
CGAP (NCI)Hs.444446
Gene ExpressionZNF818P [ NCBI-GEO ]   ZNF818P [ EBI - ARRAY_EXPRESS ]   ZNF818P [ SEEK ]   ZNF818P [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF818P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390963
GTEX Portal (Tissue expression)ZNF818P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZRF7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZRF7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZRF7
Splice isoforms : SwissVarQ6ZRF7
PhosPhoSitePlusQ6ZRF7
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF818P
DMDM Disease mutations390963
Blocks (Seattle)ZNF818P
SuperfamilyQ6ZRF7
Peptide AtlasQ6ZRF7
HPRD13537
IPIIPI00874023   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZRF7
IntAct (EBI)Q6ZRF7
BioGRIDZNF818P
STRING (EMBL)ZNF818P
ZODIACZNF818P
Ontologies - Pathways
QuickGOQ6ZRF7
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF818P
Atlas of Cancer Signalling NetworkZNF818P
Wikipedia pathwaysZNF818P
Orthology - Evolution
OrthoDB390963
Phylogenetic Trees/Animal Genes : TreeFamZNF818P
HOVERGENQ6ZRF7
HOGENOMQ6ZRF7
Homologs : HomoloGeneZNF818P
Homology/Alignments : Family Browser (UCSC)ZNF818P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF818P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF818P
dbVarZNF818P
ClinVarZNF818P
1000_GenomesZNF818P 
Exome Variant ServerZNF818P
ExAC (Exome Aggregation Consortium)ZNF818P (select the gene name)
Genetic variants : HAPMAP390963
Genomic Variants (DGV)ZNF818P [DGVbeta]
DECIPHERZNF818P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF818P 
Mutations
ICGC Data PortalZNF818P 
TCGA Data PortalZNF818P 
Broad Tumor PortalZNF818P
OASIS PortalZNF818P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF818P
BioMutasearch ZNF818P
DgiDB (Drug Gene Interaction Database)ZNF818P
DoCM (Curated mutations)ZNF818P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF818P (select a term)
intoGenZNF818P
Cancer3DZNF818P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF818P
Genetic Testing Registry ZNF818P
NextProtQ6ZRF7 [Medical]
TSGene390963
GENETestsZNF818P
Target ValidationZNF818P
Huge Navigator ZNF818P [HugePedia]
snp3D : Map Gene to Disease390963
BioCentury BCIQZNF818P
ClinGenZNF818P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390963
Clinical trialZNF818P
Miscellaneous
canSAR (ICR)ZNF818P (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF818P
EVEXZNF818P
GoPubMedZNF818P
iHOPZNF818P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:51:27 CEST 2017

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