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ZNF837 (zinc finger protein 837)

Identity

Other alias-
HGNC (Hugo) ZNF837
LocusID (NCBI) 116412
Atlas_Id 76437
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58367623 and ends at 58381022 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF837   25164
Cards
Entrez_Gene (NCBI)ZNF837  116412  zinc finger protein 837
Aliases
GeneCards (Weizmann)ZNF837
Ensembl hg19 (Hinxton)ENSG00000152475 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152475 [Gene_View]  chr19:58367623-58381022 [Contig_View]  ZNF837 [Vega]
ICGC DataPortalENSG00000152475
TCGA cBioPortalZNF837
AceView (NCBI)ZNF837
Genatlas (Paris)ZNF837
WikiGenes116412
SOURCE (Princeton)ZNF837
Genetics Home Reference (NIH)ZNF837
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF837  -     chr19:58367623-58381022 -  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF837  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblZNF837 - 19q13.43 [CytoView hg19]  ZNF837 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF837 [Mapview hg19]  ZNF837 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC012365 BC029960 BX332043 BX374687
RefSeq transcript (Entrez)NM_001129730 NM_138466
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF837
Cluster EST : UnigeneHs.222236 [ NCBI ]
CGAP (NCI)Hs.222236
Alternative Splicing GalleryENSG00000152475
Gene ExpressionZNF837 [ NCBI-GEO ]   ZNF837 [ EBI - ARRAY_EXPRESS ]   ZNF837 [ SEEK ]   ZNF837 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF837 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116412
GTEX Portal (Tissue expression)ZNF837
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EG3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EG3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EG3
Splice isoforms : SwissVarQ96EG3
PhosPhoSitePlusQ96EG3
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF837
DMDM Disease mutations116412
Blocks (Seattle)ZNF837
SuperfamilyQ96EG3
Human Protein AtlasENSG00000152475
Peptide AtlasQ96EG3
IPIIPI00402014   
Protein Interaction databases
DIP (DOE-UCLA)Q96EG3
IntAct (EBI)Q96EG3
FunCoupENSG00000152475
BioGRIDZNF837
STRING (EMBL)ZNF837
ZODIACZNF837
Ontologies - Pathways
QuickGOQ96EG3
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF837
Atlas of Cancer Signalling NetworkZNF837
Wikipedia pathwaysZNF837
Orthology - Evolution
OrthoDB116412
GeneTree (enSembl)ENSG00000152475
Phylogenetic Trees/Animal Genes : TreeFamZNF837
HOVERGENQ96EG3
HOGENOMQ96EG3
Homologs : HomoloGeneZNF837
Homology/Alignments : Family Browser (UCSC)ZNF837
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF837 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF837
dbVarZNF837
ClinVarZNF837
1000_GenomesZNF837 
Exome Variant ServerZNF837
ExAC (Exome Aggregation Consortium)ZNF837 (select the gene name)
Genetic variants : HAPMAP116412
Genomic Variants (DGV)ZNF837 [DGVbeta]
DECIPHERZNF837 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF837 
Mutations
ICGC Data PortalZNF837 
TCGA Data PortalZNF837 
Broad Tumor PortalZNF837
OASIS PortalZNF837 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF837  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF837
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF837
DgiDB (Drug Gene Interaction Database)ZNF837
DoCM (Curated mutations)ZNF837 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF837 (select a term)
intoGenZNF837
Cancer3DZNF837(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF837
Genetic Testing Registry ZNF837
NextProtQ96EG3 [Medical]
TSGene116412
GENETestsZNF837
Target ValidationZNF837
Huge Navigator ZNF837 [HugePedia]
snp3D : Map Gene to Disease116412
BioCentury BCIQZNF837
ClinGenZNF837
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD116412
Chemical/Pharm GKB GenePA162410789
Clinical trialZNF837
Miscellaneous
canSAR (ICR)ZNF837 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF837
EVEXZNF837
GoPubMedZNF837
iHOPZNF837
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:51:30 CEST 2017

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