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ZNF841 (zinc finger protein 841)

Identity

Alias (NCBI)-
HGNC (Hugo) ZNF841
HGNC Alias symbLOC284371
LocusID (NCBI) 284371
Atlas_Id 76440
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 52064465 and ends at 52095765 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ADNP (20q13.13) / ZNF841 (19q13.41)PHKB (16q12.1) / ZNF841 (19q13.41)ZNF841 (19q13.41) / ZNF432 (19q13.41)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF841   27611
Cards
Entrez_Gene (NCBI)ZNF841    zinc finger protein 841
Aliases
GeneCards (Weizmann)ZNF841
Ensembl hg19 (Hinxton)ENSG00000197608 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197608 [Gene_View]  ENSG00000197608 [Sequence]  chr19:52064465-52095765 [Contig_View]  ZNF841 [Vega]
ICGC DataPortalENSG00000197608
TCGA cBioPortalZNF841
AceView (NCBI)ZNF841
Genatlas (Paris)ZNF841
SOURCE (Princeton)ZNF841
Genetics Home Reference (NIH)ZNF841
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF841  -     chr19:52064465-52095765 -  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF841  -     19q13.41   [Description]    (hg19-Feb_2009)
GoldenPathZNF841 - 19q13.41 [CytoView hg19]  ZNF841 - 19q13.41 [CytoView hg38]
ImmunoBaseENSG00000197608
Genome Data Viewer NCBIZNF841 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK093512 AK094953 AK129938 AK131334 AK131409
RefSeq transcript (Entrez)NM_001136499 NM_001321349 NM_001352298 NM_001352299 NM_001369825 NM_001369826 NM_001369827 NM_001369828 NM_001369829 NM_001369830
Consensus coding sequences : CCDS (NCBI)ZNF841
Gene ExpressionZNF841 [ NCBI-GEO ]   ZNF841 [ EBI - ARRAY_EXPRESS ]   ZNF841 [ SEEK ]   ZNF841 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF841 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF841 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284371
GTEX Portal (Tissue expression)ZNF841
Human Protein AtlasENSG00000197608-ZNF841 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZN19   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZN19  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZN19
PhosPhoSitePlusQ6ZN19
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF841
SuperfamilyQ6ZN19
AlphaFold pdb e-kbQ6ZN19   
Human Protein Atlas [tissue]ENSG00000197608-ZNF841 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q6ZN19
IntAct (EBI)Q6ZN19
BioGRIDZNF841
STRING (EMBL)ZNF841
ZODIACZNF841
Ontologies - Pathways
QuickGOQ6ZN19
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF841
Atlas of Cancer Signalling NetworkZNF841
Wikipedia pathwaysZNF841
Orthology - Evolution
OrthoDB284371
GeneTree (enSembl)ENSG00000197608
Phylogenetic Trees/Animal Genes : TreeFamZNF841
Homologs : HomoloGeneZNF841
Homology/Alignments : Family Browser (UCSC)ZNF841
Gene fusions - Rearrangements
Fusion : QuiverZNF841
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF841 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF841
dbVarZNF841
ClinVarZNF841
MonarchZNF841
1000_GenomesZNF841 
Exome Variant ServerZNF841
GNOMAD BrowserENSG00000197608
Varsome BrowserZNF841
ACMGZNF841 variants
VarityQ6ZN19
Genomic Variants (DGV)ZNF841 [DGVbeta]
DECIPHERZNF841 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF841 
Mutations
ICGC Data PortalZNF841 
TCGA Data PortalZNF841 
Broad Tumor PortalZNF841
OASIS PortalZNF841 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF841  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF841
Mutations and Diseases : HGMDZNF841
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF841
DgiDB (Drug Gene Interaction Database)ZNF841
DoCM (Curated mutations)ZNF841
CIViC (Clinical Interpretations of Variants in Cancer)ZNF841
Cancer3DZNF841
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF841
MedgenZNF841
Genetic Testing Registry ZNF841
NextProtQ6ZN19 [Medical]
GENETestsZNF841
Target ValidationZNF841
Huge Navigator ZNF841 [HugePedia]
ClinGenZNF841
Clinical trials, drugs, therapy
MyCancerGenomeZNF841
Protein Interactions : CTDZNF841
Pharm GKB GenePA162410839
PharosQ6ZN19
Clinical trialZNF841
Miscellaneous
canSAR (ICR)ZNF841
HarmonizomeZNF841
DataMed IndexZNF841
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF841
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:30:37 CEST 2021

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