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ZNF862 (zinc finger protein 862)

Identity

Other alias-
HGNC (Hugo) ZNF862
LocusID (NCBI) 643641
Atlas_Id 76450
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 149535509 and ends at 149564568 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF862   34519
Cards
Entrez_Gene (NCBI)ZNF862  643641  zinc finger protein 862
Aliases
GeneCards (Weizmann)ZNF862
Ensembl hg19 (Hinxton)ENSG00000106479 [Gene_View]  chr7:149535509-149564568 [Contig_View]  ZNF862 [Vega]
Ensembl hg38 (Hinxton)ENSG00000106479 [Gene_View]  chr7:149535509-149564568 [Contig_View]  ZNF862 [Vega]
ICGC DataPortalENSG00000106479
TCGA cBioPortalZNF862
AceView (NCBI)ZNF862
Genatlas (Paris)ZNF862
WikiGenes643641
SOURCE (Princeton)ZNF862
Genetics Home Reference (NIH)ZNF862
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF862  -     chr7:149535509-149564568 +  7q36.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF862  -     7q36.1   [Description]    (hg38-Dec_2013)
EnsemblZNF862 - 7q36.1 [CytoView hg19]  ZNF862 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIZNF862 [Mapview hg19]  ZNF862 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB011115 AK054924 AK128787 BC041427 BC045757
RefSeq transcript (Entrez)NM_001099220
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)ZNF862
Cluster EST : UnigeneHs.731923 [ NCBI ]
CGAP (NCI)Hs.731923
Alternative Splicing GalleryENSG00000106479
Gene ExpressionZNF862 [ NCBI-GEO ]   ZNF862 [ EBI - ARRAY_EXPRESS ]   ZNF862 [ SEEK ]   ZNF862 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF862 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)643641
GTEX Portal (Tissue expression)ZNF862
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60290   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60290  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60290
Splice isoforms : SwissVarO60290
PhosPhoSitePlusO60290
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)   
Domains : Interpro (EBI)HATC_dom_C    KRAB_dom_C2H2_Znf_fam    Krueppel-associated_box    RNaseH-like_dom    Znf_TTF   
Domain families : Pfam (Sanger)Dimer_Tnp_hAT (PF05699)    KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam05699    pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_TTF (SM00597)  
Conserved Domain (NCBI)ZNF862
DMDM Disease mutations643641
Blocks (Seattle)ZNF862
SuperfamilyO60290
Human Protein AtlasENSG00000106479
Peptide AtlasO60290
IPIIPI00884448   IPI00885190   IPI00978876   IPI00945483   
Protein Interaction databases
DIP (DOE-UCLA)O60290
IntAct (EBI)O60290
FunCoupENSG00000106479
BioGRIDZNF862
STRING (EMBL)ZNF862
ZODIACZNF862
Ontologies - Pathways
QuickGOO60290
Ontology : AmiGOmolecular_function  nucleic acid binding  cellular_component  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  protein dimerization activity  
Ontology : EGO-EBImolecular_function  nucleic acid binding  cellular_component  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  protein dimerization activity  
NDEx NetworkZNF862
Atlas of Cancer Signalling NetworkZNF862
Wikipedia pathwaysZNF862
Orthology - Evolution
OrthoDB643641
GeneTree (enSembl)ENSG00000106479
Phylogenetic Trees/Animal Genes : TreeFamZNF862
HOVERGENO60290
HOGENOMO60290
Homologs : HomoloGeneZNF862
Homology/Alignments : Family Browser (UCSC)ZNF862
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF862 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF862
dbVarZNF862
ClinVarZNF862
1000_GenomesZNF862 
Exome Variant ServerZNF862
ExAC (Exome Aggregation Consortium)ZNF862 (select the gene name)
Genetic variants : HAPMAP643641
Genomic Variants (DGV)ZNF862 [DGVbeta]
DECIPHER (Syndromes)7:149535509-149564568  ENSG00000106479
CONAN: Copy Number AnalysisZNF862 
Mutations
ICGC Data PortalZNF862 
TCGA Data PortalZNF862 
Broad Tumor PortalZNF862
OASIS PortalZNF862 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF862  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF862
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF862
DgiDB (Drug Gene Interaction Database)ZNF862
DoCM (Curated mutations)ZNF862 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF862 (select a term)
intoGenZNF862
Cancer3DZNF862(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF862
Genetic Testing Registry ZNF862
NextProtO60290 [Medical]
TSGene643641
GENETestsZNF862
Huge Navigator ZNF862 [HugePedia]
snp3D : Map Gene to Disease643641
BioCentury BCIQZNF862
ClinGenZNF862
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643641
Chemical/Pharm GKB GenePA164727781
Clinical trialZNF862
Miscellaneous
canSAR (ICR)ZNF862 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF862
EVEXZNF862
GoPubMedZNF862
iHOPZNF862
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:54:04 CET 2017

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