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ZNF865 (zinc finger protein 865)

Identity

Other alias-
HGNC (Hugo) ZNF865
LocusID (NCBI) 100507290
Atlas_Id 76451
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 56124959 and ends at 56129907 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF865   38705
Cards
Entrez_Gene (NCBI)ZNF865  100507290  zinc finger protein 865
Aliases
GeneCards (Weizmann)ZNF865
Ensembl hg19 (Hinxton) [Gene_View]  chr19:56124959-56129907 [Contig_View]  ZNF865 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:56124959-56129907 [Contig_View]  ZNF865 [Vega]
TCGA cBioPortalZNF865
AceView (NCBI)ZNF865
Genatlas (Paris)ZNF865
WikiGenes100507290
SOURCE (Princeton)ZNF865
Genetics Home Reference (NIH)ZNF865
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF865  -     chr19:56124959-56129907 +  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF865  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblZNF865 - 19q13.42 [CytoView hg19]  ZNF865 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIZNF865 [Mapview hg19]  ZNF865 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001195605
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF865
Cluster EST : UnigeneHs.729114 [ NCBI ]
CGAP (NCI)Hs.729114
Gene ExpressionZNF865 [ NCBI-GEO ]   ZNF865 [ EBI - ARRAY_EXPRESS ]   ZNF865 [ SEEK ]   ZNF865 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF865 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507290
GTEX Portal (Tissue expression)ZNF865
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CJ78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CJ78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CJ78
Splice isoforms : SwissVarP0CJ78
PhosPhoSitePlusP0CJ78
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF865
DMDM Disease mutations100507290
Blocks (Seattle)ZNF865
SuperfamilyP0CJ78
Peptide AtlasP0CJ78
IPIIPI00397733   
Protein Interaction databases
DIP (DOE-UCLA)P0CJ78
IntAct (EBI)P0CJ78
BioGRIDZNF865
STRING (EMBL)ZNF865
ZODIACZNF865
Ontologies - Pathways
QuickGOP0CJ78
Ontology : AmiGODNA binding  transcription cofactor activity  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription cofactor activity  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  metal ion binding  
NDEx NetworkZNF865
Atlas of Cancer Signalling NetworkZNF865
Wikipedia pathwaysZNF865
Orthology - Evolution
OrthoDB100507290
Phylogenetic Trees/Animal Genes : TreeFamZNF865
HOVERGENP0CJ78
HOGENOMP0CJ78
Homologs : HomoloGeneZNF865
Homology/Alignments : Family Browser (UCSC)ZNF865
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF865 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF865
dbVarZNF865
ClinVarZNF865
1000_GenomesZNF865 
Exome Variant ServerZNF865
ExAC (Exome Aggregation Consortium)ZNF865 (select the gene name)
Genetic variants : HAPMAP100507290
Genomic Variants (DGV)ZNF865 [DGVbeta]
DECIPHER (Syndromes)19:56124959-56129907  
CONAN: Copy Number AnalysisZNF865 
Mutations
ICGC Data PortalZNF865 
TCGA Data PortalZNF865 
Broad Tumor PortalZNF865
OASIS PortalZNF865 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF865
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF865
DgiDB (Drug Gene Interaction Database)ZNF865
DoCM (Curated mutations)ZNF865 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF865 (select a term)
intoGenZNF865
Cancer3DZNF865(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF865
Genetic Testing Registry ZNF865
NextProtP0CJ78 [Medical]
TSGene100507290
GENETestsZNF865
Huge Navigator ZNF865 [HugePedia]
snp3D : Map Gene to Disease100507290
BioCentury BCIQZNF865
ClinGenZNF865
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507290
Clinical trialZNF865
Miscellaneous
canSAR (ICR)ZNF865 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF865
EVEXZNF865
GoPubMedZNF865
iHOPZNF865
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:54:04 CET 2017

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