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ZNF891 (zinc finger protein 891)

Identity

Other alias-
HGNC (Hugo) ZNF891
LocusID (NCBI) 101060200
Atlas_Id 76458
Location 12q24.33  [Link to chromosome band 12q24]
Location_base_pair Starts at 133119969 and ends at 133130473 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF891   38709
Cards
Entrez_Gene (NCBI)ZNF891  101060200  zinc finger protein 891
Aliases
GeneCards (Weizmann)ZNF891
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:133119969-133130473 [Contig_View]  ZNF891 [Vega]
TCGA cBioPortalZNF891
AceView (NCBI)ZNF891
Genatlas (Paris)ZNF891
WikiGenes101060200
SOURCE (Princeton)ZNF891
Genetics Home Reference (NIH)ZNF891
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF891  -     chr12:133119969-133130473 -  12q24.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF891  -     12q24.33   [Description]    (hg19-Feb_2009)
EnsemblZNF891 - 12q24.33 [CytoView hg19]  ZNF891 - 12q24.33 [CytoView hg38]
Mapping of homologs : NCBIZNF891 [Mapview hg19]  ZNF891 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC017932 DA004094 DB295002
RefSeq transcript (Entrez)NM_001277291
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF891
Cluster EST : UnigeneHs.614816 [ NCBI ]
CGAP (NCI)Hs.614816
Gene ExpressionZNF891 [ NCBI-GEO ]   ZNF891 [ EBI - ARRAY_EXPRESS ]   ZNF891 [ SEEK ]   ZNF891 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF891 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101060200
GTEX Portal (Tissue expression)ZNF891
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MT65   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MT65  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MT65
Splice isoforms : SwissVarA8MT65
PhosPhoSitePlusA8MT65
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)    zf-H2C2_2 (PF13465)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912    pfam13465   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF891
DMDM Disease mutations101060200
Blocks (Seattle)ZNF891
SuperfamilyA8MT65
Peptide AtlasA8MT65
Protein Interaction databases
DIP (DOE-UCLA)A8MT65
IntAct (EBI)A8MT65
BioGRIDZNF891
STRING (EMBL)ZNF891
ZODIACZNF891
Ontologies - Pathways
QuickGOA8MT65
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF891
Atlas of Cancer Signalling NetworkZNF891
Wikipedia pathwaysZNF891
Orthology - Evolution
OrthoDB101060200
Phylogenetic Trees/Animal Genes : TreeFamZNF891
HOVERGENA8MT65
HOGENOMA8MT65
Homologs : HomoloGeneZNF891
Homology/Alignments : Family Browser (UCSC)ZNF891
Gene fusions - Rearrangements
Tumor Fusion PortalZNF891
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF891 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF891
dbVarZNF891
ClinVarZNF891
1000_GenomesZNF891 
Exome Variant ServerZNF891
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP101060200
Genomic Variants (DGV)ZNF891 [DGVbeta]
DECIPHERZNF891 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF891 
Mutations
ICGC Data PortalZNF891 
TCGA Data PortalZNF891 
Broad Tumor PortalZNF891
OASIS PortalZNF891 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF891  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF891
BioMutasearch ZNF891
DgiDB (Drug Gene Interaction Database)ZNF891
DoCM (Curated mutations)ZNF891 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF891 (select a term)
intoGenZNF891
Cancer3DZNF891(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF891
MedgenZNF891
Genetic Testing Registry ZNF891
NextProtA8MT65 [Medical]
TSGene101060200
GENETestsZNF891
Target ValidationZNF891
Huge Navigator ZNF891 [HugePedia]
snp3D : Map Gene to Disease101060200
BioCentury BCIQZNF891
ClinGenZNF891
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101060200
Chemical/Pharm GKB GenePA166049034
Clinical trialZNF891
Miscellaneous
canSAR (ICR)ZNF891 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF891
EVEXZNF891
GoPubMedZNF891
iHOPZNF891
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:27:45 CET 2017

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