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ZNF92 (zinc finger protein 92)

Identity

Alias (NCBI)HEL-203
HPF12
HTF12
TF12
HGNC (Hugo) ZNF92
HGNC Alias symbHPF12
TF12
HGNC Previous namezinc finger protein 92 (HTF12)
LocusID (NCBI) 168374
Atlas_Id 76461
Location 7q11.21  [Link to chromosome band 7q11]
Location_base_pair Starts at 65373855 and ends at 65401136 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF92   13168
Cards
Entrez_Gene (NCBI)ZNF92    zinc finger protein 92
AliasesHEL-203; HPF12; HTF12; TF12
GeneCards (Weizmann)ZNF92
Ensembl hg19 (Hinxton)ENSG00000146757 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146757 [Gene_View]  ENSG00000146757 [Sequence]  chr7:65373855-65401136 [Contig_View]  ZNF92 [Vega]
ICGC DataPortalENSG00000146757
TCGA cBioPortalZNF92
AceView (NCBI)ZNF92
Genatlas (Paris)ZNF92
SOURCE (Princeton)ZNF92
Genetics Home Reference (NIH)ZNF92
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF92  -     chr7:65373855-65401136 +  7q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF92  -     7q11.21   [Description]    (hg19-Feb_2009)
GoldenPathZNF92 - 7q11.21 [CytoView hg19]  ZNF92 - 7q11.21 [CytoView hg38]
ImmunoBaseENSG00000146757
Genome Data Viewer NCBIZNF92 [Mapview hg19]  
OMIM603974   
Gene and transcription
Genbank (Entrez)AK091618 AK093566 BC036439 BC040594 BP284170
RefSeq transcript (Entrez)NM_001287532 NM_001287533 NM_001287534 NM_007139 NM_152626
Consensus coding sequences : CCDS (NCBI)ZNF92
Gene ExpressionZNF92 [ NCBI-GEO ]   ZNF92 [ EBI - ARRAY_EXPRESS ]   ZNF92 [ SEEK ]   ZNF92 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF92 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF92 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)168374
GTEX Portal (Tissue expression)ZNF92
Human Protein AtlasENSG00000146757-ZNF92 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ03936   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ03936  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ03936
PhosPhoSitePlusQ03936
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF92
SuperfamilyQ03936
AlphaFold pdb e-kbQ03936   
Human Protein Atlas [tissue]ENSG00000146757-ZNF92 [tissue]
HPRD04919
Protein Interaction databases
DIP (DOE-UCLA)Q03936
IntAct (EBI)Q03936
BioGRIDZNF92
STRING (EMBL)ZNF92
ZODIACZNF92
Ontologies - Pathways
QuickGOQ03936
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription factor activity  protein binding  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  zinc ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription factor activity  protein binding  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  zinc ion binding  
NDEx NetworkZNF92
Atlas of Cancer Signalling NetworkZNF92
Wikipedia pathwaysZNF92
Orthology - Evolution
OrthoDB168374
GeneTree (enSembl)ENSG00000146757
Phylogenetic Trees/Animal Genes : TreeFamZNF92
Homologs : HomoloGeneZNF92
Homology/Alignments : Family Browser (UCSC)ZNF92
Gene fusions - Rearrangements
Fusion : QuiverZNF92
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF92 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF92
dbVarZNF92
ClinVarZNF92
MonarchZNF92
1000_GenomesZNF92 
Exome Variant ServerZNF92
GNOMAD BrowserENSG00000146757
Varsome BrowserZNF92
ACMGZNF92 variants
VarityQ03936
Genomic Variants (DGV)ZNF92 [DGVbeta]
DECIPHERZNF92 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF92 
Mutations
ICGC Data PortalZNF92 
TCGA Data PortalZNF92 
Broad Tumor PortalZNF92
OASIS PortalZNF92 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF92  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF92
Mutations and Diseases : HGMDZNF92
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF92
DgiDB (Drug Gene Interaction Database)ZNF92
DoCM (Curated mutations)ZNF92
CIViC (Clinical Interpretations of Variants in Cancer)ZNF92
Cancer3DZNF92
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603974   
Orphanet
DisGeNETZNF92
MedgenZNF92
Genetic Testing Registry ZNF92
NextProtQ03936 [Medical]
GENETestsZNF92
Target ValidationZNF92
Huge Navigator ZNF92 [HugePedia]
ClinGenZNF92
Clinical trials, drugs, therapy
MyCancerGenomeZNF92
Protein Interactions : CTDZNF92
Pharm GKB GenePA37740
PharosQ03936
Clinical trialZNF92
Miscellaneous
canSAR (ICR)ZNF92
HarmonizomeZNF92
DataMed IndexZNF92
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF92
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:30:42 CEST 2021

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