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ZNRD1ASP (zinc ribbon domain containing 1 antisense, pseudogene)

Identity

Alias (NCBI)C6orf12
HCG8
HCGVIII
HCGVIII-1
HTEX4
NCRNA00171
TCTEX4
ZNRD1-AS
ZNRD1-AS1
ZNRD1AS
ZNRD1AS1
HGNC (Hugo) ZNRD1ASP
HGNC Alias symbHTEX4
Em:AB023056.3
HCGVIII
HCGVIII-1
HGNC Previous nameC6orf12
 NCRNA00171
 ZNRD1AS
 ZNRD1-AS
 ZNRD1-AS1
 HCG8
HGNC Previous namechromosome 6 open reading frame 12
 non-protein coding RNA 171
 ZNRD1 antisense RNA (non-protein coding)
 ZNRD1 antisense RNA 1 (non-protein coding)
 ZNRD1 antisense RNA 1
 HLA complex group 8
LocusID (NCBI) 80862
Atlas_Id 57345
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 30054601 and ends at 30061189 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ZNRD1ASP   13924
Cards
Entrez_Gene (NCBI)ZNRD1ASP    zinc ribbon domain containing 1 antisense, pseudogene
AliasesC6orf12; HCG8; HCGVIII; HCGVIII-1; 
HTEX4; NCRNA00171; TCTEX4; ZNRD1-AS; ZNRD1-AS1; ZNRD1AS; ZNRD1AS1
GeneCards (Weizmann)ZNRD1ASP
Ensembl hg19 (Hinxton)ENSG00000204623 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204623 [Gene_View]  ENSG00000204623 [Sequence]  chr6:30054601-30061189 [Contig_View]  ZNRD1ASP [Vega]
ICGC DataPortalENSG00000204623
TCGA cBioPortalZNRD1ASP
AceView (NCBI)ZNRD1ASP
Genatlas (Paris)ZNRD1ASP
SOURCE (Princeton)ZNRD1ASP
Genetics Home Reference (NIH)ZNRD1ASP
Genomic and cartography
GoldenPath hg38 (UCSC)ZNRD1ASP  -     chr6:30054601-30061189 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNRD1ASP  -     6p22.1   [Description]    (hg19-Feb_2009)
GoldenPathZNRD1ASP - 6p22.1 [CytoView hg19]  ZNRD1ASP - 6p22.1 [CytoView hg38]
ImmunoBaseENSG00000204623
Genome Data Viewer NCBIZNRD1ASP [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF032109 AF032110 AF032111 AF238323 AK055123
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNRD1ASP
Gene ExpressionZNRD1ASP [ NCBI-GEO ]   ZNRD1ASP [ EBI - ARRAY_EXPRESS ]   ZNRD1ASP [ SEEK ]   ZNRD1ASP [ MEM ]
Gene Expression Viewer (FireBrowse)ZNRD1ASP [ Firebrowse - Broad ]
GenevisibleExpression of ZNRD1ASP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80862
GTEX Portal (Tissue expression)ZNRD1ASP
Human Protein AtlasENSG00000204623-ZNRD1ASP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNRD1ASP
Human Protein Atlas [tissue]ENSG00000204623-ZNRD1ASP [tissue]
Protein Interaction databases
BioGRIDZNRD1ASP
STRING (EMBL)ZNRD1ASP
ZODIACZNRD1ASP
Ontologies - Pathways
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNRD1ASP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:39:30 CEST 2021

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