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ZNRD1ASP (zinc ribbon domain containing 1 antisense, pseudogene)

Identity

Alias_namesC6orf12
NCRNA00171
ZNRD1AS
ZNRD1-AS
ZNRD1-AS1
chromosome 6 open reading frame 12
non-protein coding RNA 171
ZNRD1 antisense RNA (non-protein coding)
ZNRD1 antisense RNA 1 (non-protein coding)
ZNRD1 antisense RNA 1
Alias_symbol (synonym)HTEX4
Em:AB023056.3
Other aliasHCG8
HCGVIII
HCGVIII-1
TCTEX4
ZNRD1AS1
HGNC (Hugo) ZNRD1ASP
LocusID (NCBI) 80862
Atlas_Id 78318
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 30001011 and ends at 30061189 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNRD1ASP   13924
Cards
Entrez_Gene (NCBI)ZNRD1ASP  80862  zinc ribbon domain containing 1 antisense, pseudogene
AliasesC6orf12; HCG8; HCGVIII; HCGVIII-1; 
HTEX4; NCRNA00171; TCTEX4; ZNRD1-AS; ZNRD1-AS1; ZNRD1AS; ZNRD1AS1
GeneCards (Weizmann)ZNRD1ASP
Ensembl hg19 (Hinxton)ENSG00000204623 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204623 [Gene_View]  chr6:30001011-30061189 [Contig_View]  ZNRD1ASP [Vega]
ICGC DataPortalENSG00000204623
TCGA cBioPortalZNRD1ASP
AceView (NCBI)ZNRD1ASP
Genatlas (Paris)ZNRD1ASP
WikiGenes80862
SOURCE (Princeton)ZNRD1ASP
Genetics Home Reference (NIH)ZNRD1ASP
Genomic and cartography
GoldenPath hg38 (UCSC)ZNRD1ASP  -     chr6:30001011-30061189 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNRD1ASP  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblZNRD1ASP - 6p22.1 [CytoView hg19]  ZNRD1ASP - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIZNRD1ASP [Mapview hg19]  ZNRD1ASP [Mapview hg38]
OMIM615714   
Gene and transcription
Genbank (Entrez)AF032109 AF032110 AF032111 AF238323 AK055123
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)ZNRD1ASP
Cluster EST : UnigeneHs.729074 [ NCBI ]
CGAP (NCI)Hs.729074
Alternative Splicing GalleryENSG00000204623
Gene ExpressionZNRD1ASP [ NCBI-GEO ]   ZNRD1ASP [ EBI - ARRAY_EXPRESS ]   ZNRD1ASP [ SEEK ]   ZNRD1ASP [ MEM ]
Gene Expression Viewer (FireBrowse)ZNRD1ASP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)80862
GTEX Portal (Tissue expression)ZNRD1ASP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNRD1ASP
DMDM Disease mutations80862
Blocks (Seattle)ZNRD1ASP
Human Protein AtlasENSG00000204623
IPIIPI00477196   IPI00887335   IPI00445305   IPI00867605   
Protein Interaction databases
FunCoupENSG00000204623
BioGRIDZNRD1ASP
STRING (EMBL)ZNRD1ASP
ZODIACZNRD1ASP
Ontologies - Pathways
Huge Navigator ZNRD1ASP [HugePedia]
snp3D : Map Gene to Disease80862
BioCentury BCIQZNRD1ASP
ClinGenZNRD1ASP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80862
Chemical/Pharm GKB GenePA165618433
Clinical trialZNRD1ASP
Miscellaneous
canSAR (ICR)ZNRD1ASP (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNRD1ASP
EVEXZNRD1ASP
GoPubMedZNRD1ASP
iHOPZNRD1ASP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:30 CEST 2017

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