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ZP1 (zona pellucida glycoprotein 1)

Identity

Alias_nameszona pellucida glycoprotein 1 (sperm receptor)
Other aliasHEL163
OOMD
OOMD1
HGNC (Hugo) ZP1
LocusID (NCBI) 22917
Atlas_Id 78457
Location 11q12.2  [Link to chromosome band 11q12]
Location_base_pair Starts at 60867542 and ends at 60875691 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZP1   13187
Cards
Entrez_Gene (NCBI)ZP1  22917  zona pellucida glycoprotein 1
AliasesHEL163; OOMD; OOMD1
GeneCards (Weizmann)ZP1
Ensembl hg19 (Hinxton)ENSG00000149506 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149506 [Gene_View]  chr11:60867542-60875691 [Contig_View]  ZP1 [Vega]
ICGC DataPortalENSG00000149506
TCGA cBioPortalZP1
AceView (NCBI)ZP1
Genatlas (Paris)ZP1
WikiGenes22917
SOURCE (Princeton)ZP1
Genetics Home Reference (NIH)ZP1
Genomic and cartography
GoldenPath hg38 (UCSC)ZP1  -     chr11:60867542-60875691 +  11q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZP1  -     11q12.2   [Description]    (hg19-Feb_2009)
EnsemblZP1 - 11q12.2 [CytoView hg19]  ZP1 - 11q12.2 [CytoView hg38]
Mapping of homologs : NCBIZP1 [Mapview hg19]  ZP1 [Mapview hg38]
OMIM195000   615774   
Gene and transcription
Genbank (Entrez)AI208352 AI766401 BC067899 CR741030 EU794684
RefSeq transcript (Entrez)NM_207341
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZP1
Cluster EST : UnigeneHs.172130 [ NCBI ]
CGAP (NCI)Hs.172130
Alternative Splicing GalleryENSG00000149506
Gene ExpressionZP1 [ NCBI-GEO ]   ZP1 [ EBI - ARRAY_EXPRESS ]   ZP1 [ SEEK ]   ZP1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22917
GTEX Portal (Tissue expression)ZP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP60852   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP60852  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP60852
Splice isoforms : SwissVarP60852
PhosPhoSitePlusP60852
Domaine pattern : Prosite (Expaxy)P_TREFOIL_1 (PS00025)    P_TREFOIL_2 (PS51448)    ZP_1 (PS00682)    ZP_2 (PS51034)   
Domains : Interpro (EBI)P_trefoil_CS    P_trefoil_dom    ZP_dom    ZP_dom_CS   
Domain families : Pfam (Sanger)Zona_pellucida (PF00100)   
Domain families : Pfam (NCBI)pfam00100   
Domain families : Smart (EMBL)PD (SM00018)  ZP (SM00241)  
Conserved Domain (NCBI)ZP1
DMDM Disease mutations22917
Blocks (Seattle)ZP1
SuperfamilyP60852
Human Protein AtlasENSG00000149506
Peptide AtlasP60852
HPRD15953
IPIIPI00410244   IPI01013496   IPI01013255   
Protein Interaction databases
DIP (DOE-UCLA)P60852
IntAct (EBI)P60852
FunCoupENSG00000149506
BioGRIDZP1
STRING (EMBL)ZP1
ZODIACZP1
Ontologies - Pathways
QuickGOP60852
Ontology : AmiGOextracellular region  proteinaceous extracellular matrix  Golgi apparatus  plasma membrane  binding of sperm to zona pellucida  integral component of membrane  secretory granule  
Ontology : EGO-EBIextracellular region  proteinaceous extracellular matrix  Golgi apparatus  plasma membrane  binding of sperm to zona pellucida  integral component of membrane  secretory granule  
NDEx NetworkZP1
Atlas of Cancer Signalling NetworkZP1
Wikipedia pathwaysZP1
Orthology - Evolution
OrthoDB22917
GeneTree (enSembl)ENSG00000149506
Phylogenetic Trees/Animal Genes : TreeFamZP1
HOVERGENP60852
HOGENOMP60852
Homologs : HomoloGeneZP1
Homology/Alignments : Family Browser (UCSC)ZP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZP1
dbVarZP1
ClinVarZP1
1000_GenomesZP1 
Exome Variant ServerZP1
ExAC (Exome Aggregation Consortium)ZP1 (select the gene name)
Genetic variants : HAPMAP22917
Genomic Variants (DGV)ZP1 [DGVbeta]
DECIPHERZP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZP1 
Mutations
ICGC Data PortalZP1 
TCGA Data PortalZP1 
Broad Tumor PortalZP1
OASIS PortalZP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZP1
DgiDB (Drug Gene Interaction Database)ZP1
DoCM (Curated mutations)ZP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZP1 (select a term)
intoGenZP1
Cancer3DZP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM195000    615774   
Orphanet22925   
MedgenZP1
Genetic Testing Registry ZP1
NextProtP60852 [Medical]
TSGene22917
GENETestsZP1
Target ValidationZP1
Huge Navigator ZP1 [HugePedia]
snp3D : Map Gene to Disease22917
BioCentury BCIQZP1
ClinGenZP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22917
Chemical/Pharm GKB GenePA37755
Clinical trialZP1
Miscellaneous
canSAR (ICR)ZP1 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZP1
EVEXZP1
GoPubMedZP1
iHOPZP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:51:40 CEST 2017

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