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ZP2 (zona pellucida glycoprotein 2)

Identity

Alias_nameszona pellucida glycoprotein 2 (sperm receptor)
Alias_symbol (synonym)ZPA
Other aliasZp-2
HGNC (Hugo) ZP2
LocusID (NCBI) 7783
Atlas_Id 76476
Location 16p12.3  [Link to chromosome band 16p12]
Location_base_pair Starts at 21197452 and ends at 21214510 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZP2   13188
Cards
Entrez_Gene (NCBI)ZP2  7783  zona pellucida glycoprotein 2
AliasesZPA; Zp-2
GeneCards (Weizmann)ZP2
Ensembl hg19 (Hinxton)ENSG00000103310 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103310 [Gene_View]  chr16:21197452-21214510 [Contig_View]  ZP2 [Vega]
ICGC DataPortalENSG00000103310
TCGA cBioPortalZP2
AceView (NCBI)ZP2
Genatlas (Paris)ZP2
WikiGenes7783
SOURCE (Princeton)ZP2
Genetics Home Reference (NIH)ZP2
Genomic and cartography
GoldenPath hg38 (UCSC)ZP2  -     chr16:21197452-21214510 -  16p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZP2  -     16p12.3   [Description]    (hg19-Feb_2009)
EnsemblZP2 - 16p12.3 [CytoView hg19]  ZP2 - 16p12.3 [CytoView hg38]
Mapping of homologs : NCBIZP2 [Mapview hg19]  ZP2 [Mapview hg38]
OMIM182888   
Gene and transcription
Genbank (Entrez)AK293805 AK308820 AK310454 AK313003 BC096304
RefSeq transcript (Entrez)NM_001290104 NM_003460
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZP2
Cluster EST : UnigeneHs.73982 [ NCBI ]
CGAP (NCI)Hs.73982
Alternative Splicing GalleryENSG00000103310
Gene ExpressionZP2 [ NCBI-GEO ]   ZP2 [ EBI - ARRAY_EXPRESS ]   ZP2 [ SEEK ]   ZP2 [ MEM ]
Gene Expression Viewer (FireBrowse)ZP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7783
GTEX Portal (Tissue expression)ZP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ05996   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ05996  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ05996
Splice isoforms : SwissVarQ05996
PhosPhoSitePlusQ05996
Domaine pattern : Prosite (Expaxy)ZP_1 (PS00682)    ZP_2 (PS51034)   
Domains : Interpro (EBI)ZP_dom    ZP_dom_CS   
Domain families : Pfam (Sanger)Zona_pellucida (PF00100)   
Domain families : Pfam (NCBI)pfam00100   
Domain families : Smart (EMBL)ZP (SM00241)  
Conserved Domain (NCBI)ZP2
DMDM Disease mutations7783
Blocks (Seattle)ZP2
SuperfamilyQ05996
Human Protein AtlasENSG00000103310
Peptide AtlasQ05996
HPRD01689
IPIIPI00016870   
Protein Interaction databases
DIP (DOE-UCLA)Q05996
IntAct (EBI)Q05996
FunCoupENSG00000103310
BioGRIDZP2
STRING (EMBL)ZP2
ZODIACZP2
Ontologies - Pathways
QuickGOQ05996
Ontology : AmiGOextracellular region  proteinaceous extracellular matrix  multivesicular body  endoplasmic reticulum  Golgi apparatus  plasma membrane  manganese ion transport  signal transduction  binding of sperm to zona pellucida  binding of sperm to zona pellucida  coreceptor activity  integral component of membrane  secretory granule  extracellular matrix  acrosin binding  regulation of acrosome reaction  prevention of polyspermy  
Ontology : EGO-EBIextracellular region  proteinaceous extracellular matrix  multivesicular body  endoplasmic reticulum  Golgi apparatus  plasma membrane  manganese ion transport  signal transduction  binding of sperm to zona pellucida  binding of sperm to zona pellucida  coreceptor activity  integral component of membrane  secretory granule  extracellular matrix  acrosin binding  regulation of acrosome reaction  prevention of polyspermy  
NDEx NetworkZP2
Atlas of Cancer Signalling NetworkZP2
Wikipedia pathwaysZP2
Orthology - Evolution
OrthoDB7783
GeneTree (enSembl)ENSG00000103310
Phylogenetic Trees/Animal Genes : TreeFamZP2
HOVERGENQ05996
HOGENOMQ05996
Homologs : HomoloGeneZP2
Homology/Alignments : Family Browser (UCSC)ZP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZP2
dbVarZP2
ClinVarZP2
1000_GenomesZP2 
Exome Variant ServerZP2
ExAC (Exome Aggregation Consortium)ZP2 (select the gene name)
Genetic variants : HAPMAP7783
Genomic Variants (DGV)ZP2 [DGVbeta]
DECIPHERZP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZP2 
Mutations
ICGC Data PortalZP2 
TCGA Data PortalZP2 
Broad Tumor PortalZP2
OASIS PortalZP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZP2
DgiDB (Drug Gene Interaction Database)ZP2
DoCM (Curated mutations)ZP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZP2 (select a term)
intoGenZP2
Cancer3DZP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM182888   
Orphanet
MedgenZP2
Genetic Testing Registry ZP2
NextProtQ05996 [Medical]
TSGene7783
GENETestsZP2
Target ValidationZP2
Huge Navigator ZP2 [HugePedia]
snp3D : Map Gene to Disease7783
BioCentury BCIQZP2
ClinGenZP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7783
Chemical/Pharm GKB GenePA37756
Clinical trialZP2
Miscellaneous
canSAR (ICR)ZP2 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZP2
EVEXZP2
GoPubMedZP2
iHOPZP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:31 CEST 2017

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