| Nomenclature |
HGNC (Hugo) | ZSCAN10 12997 |
| Cards |
Entrez_Gene (NCBI) | ZSCAN10 84891 zinc finger and SCAN domain containing 10 |
Aliases | ZNF206 |
GeneCards (Weizmann) | ZSCAN10 |
Ensembl hg19 (Hinxton) | ENSG00000130182 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000130182 [Gene_View] chr16:3088891-3099317 [Contig_View] ZSCAN10 [Vega] |
ICGC DataPortal | ENSG00000130182 |
TCGA cBioPortal | ZSCAN10 |
AceView (NCBI) | ZSCAN10 |
Genatlas (Paris) | ZSCAN10 |
WikiGenes | 84891 |
SOURCE (Princeton) | ZSCAN10 |
Genetics Home Reference (NIH) | ZSCAN10 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | ZSCAN10 - chr16:3088891-3099317 - 16p13.3 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | ZSCAN10 - 16p13.3 [Description] (hg19-Feb_2009) |
Ensembl | ZSCAN10 - 16p13.3 [CytoView hg19] ZSCAN10 - 16p13.3 [CytoView hg38] |
Mapping of homologs : NCBI | ZSCAN10 [Mapview hg19] ZSCAN10 [Mapview hg38] |
| Gene and transcription |
Genbank (Entrez) | AK027455 AK074736 BC111367 BC114452 CN366927 |
RefSeq transcript (Entrez) | NM_001282415 NM_001282416 NM_032805 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | ZSCAN10 |
Cluster EST : Unigene | Hs.334515 [ NCBI ] |
CGAP (NCI) | Hs.334515 |
Alternative Splicing Gallery | ENSG00000130182 |
Gene Expression | ZSCAN10 [ NCBI-GEO ] ZSCAN10 [ EBI - ARRAY_EXPRESS ]
ZSCAN10 [ SEEK ] ZSCAN10 [ MEM ] |
Gene Expression Viewer (FireBrowse) | ZSCAN10 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 84891 |
GTEX Portal (Tissue expression) | ZSCAN10 |
Human Protein Atlas | ENSG00000130182-ZSCAN10 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q96SZ4 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q96SZ4 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q96SZ4 |
Splice isoforms : SwissVar | Q96SZ4 |
PhosPhoSitePlus | Q96SZ4 |
Domaine pattern : Prosite (Expaxy) | SCAN_BOX (PS50804) ZINC_FINGER_C2H2_1 (PS00028) ZINC_FINGER_C2H2_2 (PS50157) |
Domains : Interpro (EBI) | Retrov_capsid_C SCAN_dom Znf_C2H2 Znf_C2H2-like Znf_C2H2/integrase_DNA-bd |
Domain families : Pfam (Sanger) | SCAN (PF02023) zf-C2H2 (PF00096) zf-C2H2_6 (PF13912) |
Domain families : Pfam (NCBI) | pfam02023 pfam00096 pfam13912 |
Domain families : Smart (EMBL) | SCAN (SM00431) ZnF_C2H2 (SM00355) |
Conserved Domain (NCBI) | ZSCAN10 |
DMDM Disease mutations | 84891 |
Blocks (Seattle) | ZSCAN10 |
Superfamily | Q96SZ4 |
Human Protein Atlas [tissue] | ENSG00000130182-ZSCAN10 [tissue] |
Peptide Atlas | Q96SZ4 |
HPRD | 15747 |
IPI | IPI00045938 IPI00967302 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q96SZ4 |
IntAct (EBI) | Q96SZ4 |
FunCoup | ENSG00000130182 |
BioGRID | ZSCAN10 |
STRING (EMBL) | ZSCAN10 |
ZODIAC | ZSCAN10 |
| Ontologies - Pathways |
QuickGO | Q96SZ4 |
Ontology : AmiGO | DNA binding transcription factor activity DNA binding transcription factor activity nucleus nucleoplasm transcription, DNA-templated regulation of transcription, DNA-templated somatic stem cell population maintenance sequence-specific DNA binding negative regulation of transcription, DNA-templated metal ion binding |
Ontology : EGO-EBI | DNA binding transcription factor activity DNA binding transcription factor activity nucleus nucleoplasm transcription, DNA-templated regulation of transcription, DNA-templated somatic stem cell population maintenance sequence-specific DNA binding negative regulation of transcription, DNA-templated metal ion binding |
NDEx Network | ZSCAN10 |
Atlas of Cancer Signalling Network | ZSCAN10 |
Wikipedia pathways | ZSCAN10 |
| Orthology - Evolution |
OrthoDB | 84891 |
GeneTree (enSembl) | ENSG00000130182 |
Phylogenetic Trees/Animal Genes : TreeFam | ZSCAN10 |
HOVERGEN | Q96SZ4 |
HOGENOM | Q96SZ4 |
Homologs : HomoloGene | ZSCAN10 |
Homology/Alignments : Family Browser (UCSC) | ZSCAN10 |
| Gene fusions - Rearrangements |
Fusion : Quiver | ZSCAN10 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | ZSCAN10 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | ZSCAN10 |
dbVar | ZSCAN10 |
ClinVar | ZSCAN10 |
1000_Genomes | ZSCAN10 |
Exome Variant Server | ZSCAN10 |
ExAC (Exome Aggregation Consortium) | ENSG00000130182 |
GNOMAD Browser | ENSG00000130182 |
Genetic variants : HAPMAP | 84891 |
Genomic Variants (DGV) | ZSCAN10 [DGVbeta] |
DECIPHER | ZSCAN10 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | ZSCAN10 |
| Mutations |
ICGC Data Portal | ZSCAN10 |
TCGA Data Portal | ZSCAN10 |
Broad Tumor Portal | ZSCAN10 |
OASIS Portal | ZSCAN10 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | ZSCAN10 [overview] [genome browser] [tissue] [distribution] |
Mutations and Diseases : HGMD | ZSCAN10 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search ZSCAN10 |
DgiDB (Drug Gene Interaction Database) | ZSCAN10 |
DoCM (Curated mutations) | ZSCAN10 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | ZSCAN10 (select a term) |
intoGen | ZSCAN10 |
Cancer3D | ZSCAN10(select the gene name) |
Impact of mutations | [PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | |
Orphanet | |
DisGeNET | ZSCAN10 |
Medgen | ZSCAN10 |
Genetic Testing Registry | ZSCAN10
|
NextProt | Q96SZ4 [Medical] |
TSGene | 84891 |
GENETests | ZSCAN10 |
Target Validation | ZSCAN10 |
Huge Navigator |
ZSCAN10 [HugePedia] |
snp3D : Map Gene to Disease | 84891 |
BioCentury BCIQ | ZSCAN10 |
ClinGen | ZSCAN10 |
| Clinical trials, drugs, therapy |
---|
Chemical/Protein Interactions : CTD | 84891 |
Chemical/Pharm GKB Gene | PA162410957 |
Clinical trial | ZSCAN10 |
| Miscellaneous |
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canSAR (ICR) | ZSCAN10 (select the gene name) |
| Probes |
---|
| Litterature |
---|
PubMed | 9 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | ZSCAN10 |
EVEX | ZSCAN10 |
GoPubMed | ZSCAN10 |
iHOP | ZSCAN10 |