Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZSCAN12P1 (zinc finger and SCAN domain containing 12 pseudogene 1)

Identity

Alias (NCBI)ZNF187p1
ZNF305P1
ZNF96L1
ZNF96P1
ZSCAN12L1
dJ313I6.7
HGNC (Hugo) ZSCAN12P1
HGNC Alias symbZNF187p1
dJ313I6.7
HGNC Previous nameZNF305P1
 ZNF96P1
 ZNF96L1
 ZSCAN12L1
HGNC Previous namezinc finger protein 305 pseudogene 1
 zinc finger protein 96 pseudogene 1
 zinc finger protein 96-like 1
 zinc finger and SCAN domain containing 12-like 1
LocusID (NCBI) 221584
Atlas_Id 76488
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 28090807 and ends at 28095715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZSCAN12P1   13850
Cards
Entrez_Gene (NCBI)ZSCAN12P1  221584  zinc finger and SCAN domain containing 12 pseudogene 1
AliasesZNF187p1; ZNF305P1; ZNF96L1; ZNF96P1; 
ZSCAN12L1; dJ313I6.7
GeneCards (Weizmann)ZSCAN12P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:28090807-28095715 [Contig_View]  ZSCAN12P1 [Vega]
TCGA cBioPortalZSCAN12P1
AceView (NCBI)ZSCAN12P1
Genatlas (Paris)ZSCAN12P1
WikiGenes221584
SOURCE (Princeton)ZSCAN12P1
Genetics Home Reference (NIH)ZSCAN12P1
Genomic and cartography
GoldenPath hg38 (UCSC)ZSCAN12P1  -     chr6:28090807-28095715 +  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZSCAN12P1  -     6p22.1   [Description]    (hg19-Feb_2009)
GoldenPathZSCAN12P1 - 6p22.1 [CytoView hg19]  ZSCAN12P1 - 6p22.1 [CytoView hg38]
genome Data Viewer NCBIZSCAN12P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK055113 AK127188 BC040524 BU632557
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZSCAN12P1
Gene ExpressionZSCAN12P1 [ NCBI-GEO ]   ZSCAN12P1 [ EBI - ARRAY_EXPRESS ]   ZSCAN12P1 [ SEEK ]   ZSCAN12P1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZSCAN12P1 [ Firebrowse - Broad ]
GenevisibleExpression of ZSCAN12P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)221584
GTEX Portal (Tissue expression)ZSCAN12P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZSCAN12P1
DMDM Disease mutations221584
Blocks (Seattle)ZSCAN12P1
Protein Interaction databases
BioGRIDZSCAN12P1
STRING (EMBL)ZSCAN12P1
ZODIACZSCAN12P1
Ontologies - Pathways
Huge Navigator ZSCAN12P1 [HugePedia]
snp3D : Map Gene to Disease221584
BioCentury BCIQZSCAN12P1
ClinGenZSCAN12P1
Clinical trials, drugs, therapy
Protein Interactions : CTD221584
Clinical trialZSCAN12P1
Miscellaneous
canSAR (ICR)ZSCAN12P1 (select the gene name)
HarmonizomeZSCAN12P1
DataMed IndexZSCAN12P1
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZSCAN12P1
EVEXZSCAN12P1
GoPubMedZSCAN12P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Aug 22 19:41:41 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.