ZSCAN18 (zinc finger and SCAN domain containing 18)

2015-03-01  

Identity

HGNC
ZSCAN18
LOCATION
19q13.43
LOCUSID
65982
ALIAS
ZNF447
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 65982
HGNC: 21037
Ensembl: ENSG00000121413

Variants:

dbSNP: 65982
ClinVar: 65982
TCGA: ENSG00000121413
COSMIC: ZSCAN18

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000121413ENST00000240727Q8TBC5
ENSG00000121413ENST00000240727A0A024R4T0
ENSG00000121413ENST00000421612Q8TBC5
ENSG00000121413ENST00000433686A0A0C4DG78
ENSG00000121413ENST00000595721M0R3C6
ENSG00000121413ENST00000595944M0R111
ENSG00000121413ENST00000600404Q8TBC5
ENSG00000121413ENST00000600522M0QZ65
ENSG00000121413ENST00000600845M0R1U9
ENSG00000121413ENST00000600897M0R364
ENSG00000121413ENST00000601063M0QXJ0
ENSG00000121413ENST00000601144Q8TBC5
ENSG00000121413ENST00000601144A0A024R4T0

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
249480442015The novel colorectal cancer biomarkers CDO1, ZSCAN18 and ZNF331 are frequently methylated across gastrointestinal cancers.26

Citation

Dessen P

ZSCAN18 (zinc finger and SCAN domain containing 18)

Atlas Genet Cytogenet Oncol Haematol. 2015-03-01

Online version: http://atlasgeneticsoncology.org/gene/55097/zscan18