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ZSCAN22 (zinc finger and SCAN domain containing 22)

Identity

Alias_namesZNF50
HKR2
zinc finger protein 50
GLI-Kruppel family member HKR2
Other alias
HGNC (Hugo) ZSCAN22
LocusID (NCBI) 342945
Atlas_Id 40829
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58327019 and ends at 58342346 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZSCAN22   4929
Cards
Entrez_Gene (NCBI)ZSCAN22  342945  zinc finger and SCAN domain containing 22
AliasesHKR2; ZNF50
GeneCards (Weizmann)ZSCAN22
Ensembl hg19 (Hinxton)ENSG00000182318 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182318 [Gene_View]  ENSG00000182318 [Sequence]  chr19:58327019-58342346 [Contig_View]  ZSCAN22 [Vega]
ICGC DataPortalENSG00000182318
TCGA cBioPortalZSCAN22
AceView (NCBI)ZSCAN22
Genatlas (Paris)ZSCAN22
WikiGenes342945
SOURCE (Princeton)ZSCAN22
Genetics Home Reference (NIH)ZSCAN22
Genomic and cartography
GoldenPath hg38 (UCSC)ZSCAN22  -     chr19:58327019-58342346 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZSCAN22  -     19q13.43   [Description]    (hg19-Feb_2009)
GoldenPathZSCAN22 - 19q13.43 [CytoView hg19]  ZSCAN22 - 19q13.43 [CytoView hg38]
ImmunoBaseENSG00000182318
Mapping of homologs : NCBIZSCAN22 [Mapview hg19]  ZSCAN22 [Mapview hg38]
OMIM165260   
Gene and transcription
Genbank (Entrez)AK128716 BC101630 BC112277 BC143446 BM669173
RefSeq transcript (Entrez)NM_001321116 NM_001321117 NM_181846
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZSCAN22
Alternative Splicing GalleryENSG00000182318
Gene ExpressionZSCAN22 [ NCBI-GEO ]   ZSCAN22 [ EBI - ARRAY_EXPRESS ]   ZSCAN22 [ SEEK ]   ZSCAN22 [ MEM ]
Gene Expression Viewer (FireBrowse)ZSCAN22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)342945
GTEX Portal (Tissue expression)ZSCAN22
Human Protein AtlasENSG00000182318-ZSCAN22 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZSCAN22
DMDM Disease mutations342945
Blocks (Seattle)ZSCAN22
Human Protein Atlas [tissue]ENSG00000182318-ZSCAN22 [tissue]
HPRD01315
IPIIPI00302884   
Protein Interaction databases
FunCoupENSG00000182318
BioGRIDZSCAN22
STRING (EMBL)ZSCAN22
ZODIACZSCAN22
Ontologies - Pathways
Huge Navigator ZSCAN22 [HugePedia]
snp3D : Map Gene to Disease342945
BioCentury BCIQZSCAN22
ClinGenZSCAN22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD342945
Chemical/Pharm GKB GenePA29307
Clinical trialZSCAN22
Miscellaneous
canSAR (ICR)ZSCAN22 (select the gene name)
DataMed IndexZSCAN22
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZSCAN22
EVEXZSCAN22
GoPubMedZSCAN22
iHOPZSCAN22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:17:55 CET 2020

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