Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZSWIM8-AS1 (ZSWIM8 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) ZSWIM8-AS1
LocusID (NCBI) 100507331
Atlas_Id 76511
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 73796514 and ends at 73801399 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZSWIM8-AS1   45103
Cards
Entrez_Gene (NCBI)ZSWIM8-AS1  100507331  ZSWIM8 antisense RNA 1
Aliases
GeneCards (Weizmann)ZSWIM8-AS1
Ensembl hg19 (Hinxton)ENSG00000272589 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000272589 [Gene_View]  chr10:73796514-73801399 [Contig_View]  ZSWIM8-AS1 [Vega]
ICGC DataPortalENSG00000272589
TCGA cBioPortalZSWIM8-AS1
AceView (NCBI)ZSWIM8-AS1
Genatlas (Paris)ZSWIM8-AS1
WikiGenes100507331
SOURCE (Princeton)ZSWIM8-AS1
Genetics Home Reference (NIH)ZSWIM8-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZSWIM8-AS1  -     chr10:73796514-73801399 -  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZSWIM8-AS1  -     10q22.2   [Description]    (hg19-Feb_2009)
EnsemblZSWIM8-AS1 - 10q22.2 [CytoView hg19]  ZSWIM8-AS1 - 10q22.2 [CytoView hg38]
Mapping of homologs : NCBIZSWIM8-AS1 [Mapview hg19]  ZSWIM8-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL080182 BQ003405
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZSWIM8-AS1
Cluster EST : UnigeneHs.631828 [ NCBI ]
CGAP (NCI)Hs.631828
Alternative Splicing GalleryENSG00000272589
Gene ExpressionZSWIM8-AS1 [ NCBI-GEO ]   ZSWIM8-AS1 [ EBI - ARRAY_EXPRESS ]   ZSWIM8-AS1 [ SEEK ]   ZSWIM8-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZSWIM8-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507331
GTEX Portal (Tissue expression)ZSWIM8-AS1
Human Protein AtlasENSG00000272589-ZSWIM8-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZSWIM8-AS1
DMDM Disease mutations100507331
Blocks (Seattle)ZSWIM8-AS1
Human Protein Atlas [tissue]ENSG00000272589-ZSWIM8-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000272589
BioGRIDZSWIM8-AS1
STRING (EMBL)ZSWIM8-AS1
ZODIACZSWIM8-AS1
Ontologies - Pathways
Huge Navigator ZSWIM8-AS1 [HugePedia]
snp3D : Map Gene to Disease100507331
BioCentury BCIQZSWIM8-AS1
ClinGenZSWIM8-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507331
Clinical trialZSWIM8-AS1
Miscellaneous
canSAR (ICR)ZSWIM8-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineZSWIM8-AS1
EVEXZSWIM8-AS1
GoPubMedZSWIM8-AS1
iHOPZSWIM8-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:22:55 CET 2017

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