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ZWILCH (zwilch kinetochore protein)

Identity

Alias_namesZwilch, kinetochore associated, homolog (Drosophila)
Alias_symbol (synonym)FLJ10036
KNTC1AP
Other aliashZwilch
HGNC (Hugo) ZWILCH
LocusID (NCBI) 55055
Atlas_Id 76513
Location 15q22.31  [Link to chromosome band 15q22]
Location_base_pair Starts at 66505083 and ends at 66549484 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZWILCH (15q22.31) / ATG16L2 (11q13.4)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZWILCH   25468
Cards
Entrez_Gene (NCBI)ZWILCH  55055  zwilch kinetochore protein
AliasesKNTC1AP; hZwilch
GeneCards (Weizmann)ZWILCH
Ensembl hg19 (Hinxton)ENSG00000174442 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174442 [Gene_View]  chr15:66505083-66549484 [Contig_View]  ZWILCH [Vega]
ICGC DataPortalENSG00000174442
TCGA cBioPortalZWILCH
AceView (NCBI)ZWILCH
Genatlas (Paris)ZWILCH
WikiGenes55055
SOURCE (Princeton)ZWILCH
Genetics Home Reference (NIH)ZWILCH
Genomic and cartography
GoldenPath hg38 (UCSC)ZWILCH  -     chr15:66505083-66549484 +  15q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZWILCH  -     15q22.31   [Description]    (hg19-Feb_2009)
EnsemblZWILCH - 15q22.31 [CytoView hg19]  ZWILCH - 15q22.31 [CytoView hg38]
Mapping of homologs : NCBIZWILCH [Mapview hg19]  ZWILCH [Mapview hg38]
OMIM609984   
Gene and transcription
Genbank (Entrez)AK000898 AK023175 AK027468 AK122787 AK291048
RefSeq transcript (Entrez)NM_001287821 NM_001287822 NM_001287823 NM_017975
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZWILCH
Cluster EST : UnigeneHs.21331 [ NCBI ]
CGAP (NCI)Hs.21331
Alternative Splicing GalleryENSG00000174442
Gene ExpressionZWILCH [ NCBI-GEO ]   ZWILCH [ EBI - ARRAY_EXPRESS ]   ZWILCH [ SEEK ]   ZWILCH [ MEM ]
Gene Expression Viewer (FireBrowse)ZWILCH [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55055
GTEX Portal (Tissue expression)ZWILCH
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H900   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H900  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H900
Splice isoforms : SwissVarQ9H900
PhosPhoSitePlusQ9H900
Domains : Interpro (EBI)RZZ-complex_zwilch   
Domain families : Pfam (Sanger)DUF2352 (PF09817)   
Domain families : Pfam (NCBI)pfam09817   
Conserved Domain (NCBI)ZWILCH
DMDM Disease mutations55055
Blocks (Seattle)ZWILCH
PDB (SRS)3IF8   
PDB (PDBSum)3IF8   
PDB (IMB)3IF8   
PDB (RSDB)3IF8   
Structural Biology KnowledgeBase3IF8   
SCOP (Structural Classification of Proteins)3IF8   
CATH (Classification of proteins structures)3IF8   
SuperfamilyQ9H900
Human Protein AtlasENSG00000174442
Peptide AtlasQ9H900
HPRD07640
IPIIPI00329679   IPI00878098   
Protein Interaction databases
DIP (DOE-UCLA)Q9H900
IntAct (EBI)Q9H900
FunCoupENSG00000174442
BioGRIDZWILCH
STRING (EMBL)ZWILCH
ZODIACZWILCH
Ontologies - Pathways
QuickGOQ9H900
Ontology : AmiGOkinetochore  condensed chromosome kinetochore  protein binding  cytosol  sister chromatid cohesion  mitotic cell cycle checkpoint  cell division  RZZ complex  
Ontology : EGO-EBIkinetochore  condensed chromosome kinetochore  protein binding  cytosol  sister chromatid cohesion  mitotic cell cycle checkpoint  cell division  RZZ complex  
NDEx NetworkZWILCH
Atlas of Cancer Signalling NetworkZWILCH
Wikipedia pathwaysZWILCH
Orthology - Evolution
OrthoDB55055
GeneTree (enSembl)ENSG00000174442
Phylogenetic Trees/Animal Genes : TreeFamZWILCH
HOVERGENQ9H900
HOGENOMQ9H900
Homologs : HomoloGeneZWILCH
Homology/Alignments : Family Browser (UCSC)ZWILCH
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZWILCH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZWILCH
dbVarZWILCH
ClinVarZWILCH
1000_GenomesZWILCH 
Exome Variant ServerZWILCH
ExAC (Exome Aggregation Consortium)ZWILCH (select the gene name)
Genetic variants : HAPMAP55055
Genomic Variants (DGV)ZWILCH [DGVbeta]
DECIPHERZWILCH [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZWILCH 
Mutations
ICGC Data PortalZWILCH 
TCGA Data PortalZWILCH 
Broad Tumor PortalZWILCH
OASIS PortalZWILCH [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZWILCH  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZWILCH
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZWILCH
DgiDB (Drug Gene Interaction Database)ZWILCH
DoCM (Curated mutations)ZWILCH (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZWILCH (select a term)
intoGenZWILCH
Cancer3DZWILCH(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609984   
Orphanet
MedgenZWILCH
Genetic Testing Registry ZWILCH
NextProtQ9H900 [Medical]
TSGene55055
GENETestsZWILCH
Target ValidationZWILCH
Huge Navigator ZWILCH [HugePedia]
snp3D : Map Gene to Disease55055
BioCentury BCIQZWILCH
ClinGenZWILCH
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55055
Chemical/Pharm GKB GenePA142670465
Clinical trialZWILCH
Miscellaneous
canSAR (ICR)ZWILCH (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZWILCH
EVEXZWILCH
GoPubMedZWILCH
iHOPZWILCH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:36 CEST 2017

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