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ZWILCH (zwilch kinetochore protein)

Identity

Alias (NCBI)KNTC1AP
hZwilch
HGNC (Hugo) ZWILCH
HGNC Alias symbFLJ10036
KNTC1AP
HGNC Previous nameZwilch, kinetochore associated, homolog (Drosophila)
LocusID (NCBI) 55055
Atlas_Id 76513
Location 15q22.31  [Link to chromosome band 15q22]
Location_base_pair Starts at 66505326 and ends at 66550130 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZWILCH (15q22.31) / ATG16L2 (11q13.4)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZWILCH   25468
Cards
Entrez_Gene (NCBI)ZWILCH    zwilch kinetochore protein
AliasesKNTC1AP; hZwilch
GeneCards (Weizmann)ZWILCH
Ensembl hg19 (Hinxton)ENSG00000174442 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174442 [Gene_View]  ENSG00000174442 [Sequence]  chr15:66505326-66550130 [Contig_View]  ZWILCH [Vega]
ICGC DataPortalENSG00000174442
TCGA cBioPortalZWILCH
AceView (NCBI)ZWILCH
Genatlas (Paris)ZWILCH
SOURCE (Princeton)ZWILCH
Genetics Home Reference (NIH)ZWILCH
Genomic and cartography
GoldenPath hg38 (UCSC)ZWILCH  -     chr15:66505326-66550130 +  15q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZWILCH  -     15q22.31   [Description]    (hg19-Feb_2009)
GoldenPathZWILCH - 15q22.31 [CytoView hg19]  ZWILCH - 15q22.31 [CytoView hg38]
ImmunoBaseENSG00000174442
Genome Data Viewer NCBIZWILCH [Mapview hg19]  
OMIM609984   
Gene and transcription
Genbank (Entrez)AK000898 AK023175 AK027468 AK122787 AK291048
RefSeq transcript (Entrez)NM_001287821 NM_001287822 NM_001287823 NM_017975
Consensus coding sequences : CCDS (NCBI)ZWILCH
Gene ExpressionZWILCH [ NCBI-GEO ]   ZWILCH [ EBI - ARRAY_EXPRESS ]   ZWILCH [ SEEK ]   ZWILCH [ MEM ]
Gene Expression Viewer (FireBrowse)ZWILCH [ Firebrowse - Broad ]
GenevisibleExpression of ZWILCH in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55055
GTEX Portal (Tissue expression)ZWILCH
Human Protein AtlasENSG00000174442-ZWILCH [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H900   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H900  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H900
PhosPhoSitePlusQ9H900
Domains : Interpro (EBI)Zwilch   
Domain families : Pfam (Sanger)Zwilch (PF09817)   
Domain families : Pfam (NCBI)pfam09817   
Conserved Domain (NCBI)ZWILCH
PDB (RSDB)3IF8   
PDB Europe3IF8   
PDB (PDBSum)3IF8   
PDB (IMB)3IF8   
Structural Biology KnowledgeBase3IF8   
SCOP (Structural Classification of Proteins)3IF8   
CATH (Classification of proteins structures)3IF8   
SuperfamilyQ9H900
AlphaFold pdb e-kbQ9H900   
Human Protein Atlas [tissue]ENSG00000174442-ZWILCH [tissue]
HPRD07640
Protein Interaction databases
DIP (DOE-UCLA)Q9H900
IntAct (EBI)Q9H900
BioGRIDZWILCH
STRING (EMBL)ZWILCH
ZODIACZWILCH
Ontologies - Pathways
QuickGOQ9H900
Ontology : AmiGOkinetochore  protein binding  cytosol  mitotic spindle organization  mitotic cell cycle checkpoint signaling  protein localization to kinetochore  cell division  RZZ complex  
Ontology : EGO-EBIkinetochore  protein binding  cytosol  mitotic spindle organization  mitotic cell cycle checkpoint signaling  protein localization to kinetochore  cell division  RZZ complex  
NDEx NetworkZWILCH
Atlas of Cancer Signalling NetworkZWILCH
Wikipedia pathwaysZWILCH
Orthology - Evolution
OrthoDB55055
GeneTree (enSembl)ENSG00000174442
Phylogenetic Trees/Animal Genes : TreeFamZWILCH
Homologs : HomoloGeneZWILCH
Homology/Alignments : Family Browser (UCSC)ZWILCH
Gene fusions - Rearrangements
Fusion : QuiverZWILCH
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZWILCH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZWILCH
dbVarZWILCH
ClinVarZWILCH
MonarchZWILCH
1000_GenomesZWILCH 
Exome Variant ServerZWILCH
GNOMAD BrowserENSG00000174442
Varsome BrowserZWILCH
ACMGZWILCH variants
VarityQ9H900
Genomic Variants (DGV)ZWILCH [DGVbeta]
DECIPHERZWILCH [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZWILCH 
Mutations
ICGC Data PortalZWILCH 
TCGA Data PortalZWILCH 
Broad Tumor PortalZWILCH
OASIS PortalZWILCH [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZWILCH  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZWILCH
Mutations and Diseases : HGMDZWILCH
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZWILCH
DgiDB (Drug Gene Interaction Database)ZWILCH
DoCM (Curated mutations)ZWILCH
CIViC (Clinical Interpretations of Variants in Cancer)ZWILCH
Cancer3DZWILCH
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609984   
Orphanet
DisGeNETZWILCH
MedgenZWILCH
Genetic Testing Registry ZWILCH
NextProtQ9H900 [Medical]
GENETestsZWILCH
Target ValidationZWILCH
Huge Navigator ZWILCH [HugePedia]
ClinGenZWILCH
Clinical trials, drugs, therapy
MyCancerGenomeZWILCH
Protein Interactions : CTDZWILCH
Pharm GKB GenePA142670465
PharosQ9H900
Clinical trialZWILCH
Miscellaneous
canSAR (ICR)ZWILCH
HarmonizomeZWILCH
DataMed IndexZWILCH
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZWILCH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:30:51 CEST 2021

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