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ZYG11A (zyg-11 family member A, cell cycle regulator)

Identity

Other aliasZYG11
HGNC (Hugo) ZYG11A
LocusID (NCBI) 440590
Atlas_Id 56702
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 52842511 and ends at 52894575 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZYG11A   32058
Cards
Entrez_Gene (NCBI)ZYG11A  440590  zyg-11 family member A, cell cycle regulator
AliasesZYG11
GeneCards (Weizmann)ZYG11A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:52842511-52894575 [Contig_View]  ZYG11A [Vega]
TCGA cBioPortalZYG11A
AceView (NCBI)ZYG11A
Genatlas (Paris)ZYG11A
WikiGenes440590
SOURCE (Princeton)ZYG11A
Genetics Home Reference (NIH)ZYG11A
Genomic and cartography
GoldenPath hg38 (UCSC)ZYG11A  -     chr1:52842511-52894575 +  1p32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZYG11A  -     1p32.3   [Description]    (hg19-Feb_2009)
EnsemblZYG11A - 1p32.3 [CytoView hg19]  ZYG11A - 1p32.3 [CytoView hg38]
Mapping of homologs : NCBIZYG11A [Mapview hg19]  ZYG11A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI638616 AY271826 BC119789 BC119815
RefSeq transcript (Entrez)NM_001004339 NM_001307931
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZYG11A
Cluster EST : UnigeneHs.658458 [ NCBI ]
CGAP (NCI)Hs.658458
Gene ExpressionZYG11A [ NCBI-GEO ]   ZYG11A [ EBI - ARRAY_EXPRESS ]   ZYG11A [ SEEK ]   ZYG11A [ MEM ]
Gene Expression Viewer (FireBrowse)ZYG11A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)440590
GTEX Portal (Tissue expression)ZYG11A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6WRX3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6WRX3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6WRX3
Splice isoforms : SwissVarQ6WRX3
PhosPhoSitePlusQ6WRX3
Domains : Interpro (EBI)ARM-like    ARM-type_fold    L_dom-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZYG11A
DMDM Disease mutations440590
Blocks (Seattle)ZYG11A
SuperfamilyQ6WRX3
Peptide AtlasQ6WRX3
IPIIPI00657646   IPI00450329   
Protein Interaction databases
DIP (DOE-UCLA)Q6WRX3
IntAct (EBI)Q6WRX3
BioGRIDZYG11A
STRING (EMBL)ZYG11A
ZODIACZYG11A
Ontologies - Pathways
QuickGOQ6WRX3
Ontology : AmiGOubiquitin-protein transferase activity  protein ubiquitination  Cul2-RING ubiquitin ligase complex  regulation of ubiquitin-protein transferase activity  
Ontology : EGO-EBIubiquitin-protein transferase activity  protein ubiquitination  Cul2-RING ubiquitin ligase complex  regulation of ubiquitin-protein transferase activity  
NDEx NetworkZYG11A
Atlas of Cancer Signalling NetworkZYG11A
Wikipedia pathwaysZYG11A
Orthology - Evolution
OrthoDB440590
Phylogenetic Trees/Animal Genes : TreeFamZYG11A
HOVERGENQ6WRX3
HOGENOMQ6WRX3
Homologs : HomoloGeneZYG11A
Homology/Alignments : Family Browser (UCSC)ZYG11A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZYG11A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZYG11A
dbVarZYG11A
ClinVarZYG11A
1000_GenomesZYG11A 
Exome Variant ServerZYG11A
ExAC (Exome Aggregation Consortium)ZYG11A (select the gene name)
Genetic variants : HAPMAP440590
Genomic Variants (DGV)ZYG11A [DGVbeta]
DECIPHERZYG11A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZYG11A 
Mutations
ICGC Data PortalZYG11A 
TCGA Data PortalZYG11A 
Broad Tumor PortalZYG11A
OASIS PortalZYG11A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZYG11A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZYG11A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZYG11A
DgiDB (Drug Gene Interaction Database)ZYG11A
DoCM (Curated mutations)ZYG11A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZYG11A (select a term)
intoGenZYG11A
Cancer3DZYG11A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZYG11A
Genetic Testing Registry ZYG11A
NextProtQ6WRX3 [Medical]
TSGene440590
GENETestsZYG11A
Target ValidationZYG11A
Huge Navigator ZYG11A [HugePedia]
snp3D : Map Gene to Disease440590
BioCentury BCIQZYG11A
ClinGenZYG11A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440590
Chemical/Pharm GKB GenePA142670467
Clinical trialZYG11A
Miscellaneous
canSAR (ICR)ZYG11A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZYG11A
EVEXZYG11A
GoPubMedZYG11A
iHOPZYG11A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:04:03 CEST 2017

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